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Domain assignment for WP_078052014.1.63416 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_078052014.1.63416
Domain Number 1 Region: 1359-1605
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 2.55e-44
Family Complement components 0.0074
Further Details:      
 
Domain Number 2 Region: 139-264
Classification Level Classification E-value
Superfamily TPR-like 0.00000000266
Family Tetratricopeptide repeat (TPR) 0.037
Further Details:      
 
Domain Number 3 Region: 42-86
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.00000294
Family Hairpin loop containing domain 0.069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_078052014.1.63416
Sequence length 1818
Comment hypothetical protein [Agrobacterium sp. YIC 4121]; AA=GCF_002008205.1; RF=na; TAX=1923829; STAX=1923829; NAME=Agrobacterium sp. YIC 4121; strain=YIC 4121; AL=Contig; RT=Major
Sequence
MSLRALVRISLVAVSTALFFQPAMAAEPSRKVVTTQNGDYFGFDLRTEQNVSLEQCGEIC
VGDTACKAFTYNPKVKWCFLKSDFNQLNAFPGAVAGKIVEVAAEADIGAPQRLSFVIDSL
QQEARRLKSGLAANEGEGEQGLEALVETARQQAAAGNIPDAVTTYKQALAITPDDGALWA
ELSEKAAQVTDNYSIAGQAASAAINAYQLSRTVSARTEALNRLAKAFERTQNYRAALNAY
KESLALTDNAQTKAAYADLRTRQGFRVINNTVDTDSISPRACVQFSEPLVKNGVDYSSFI
TLDGAAPKAIEAKGSEICVEGLTHGQRYKIAFRAGLPSSVEEPLEKQVDLDIYVRDRAAS
VRFTGENFVLPGTARRGIPIVSVNADKADLKLYRVGDRNITSLLSNSQFLTQMDGYNADR
IENEIGELVWQGSIDIQPDLNKDVVTSFPVDEALPERKPGIYVLTAVPPGTAPETWDSRA
TQWFLVSDTGITTYAGTDGLNVFVRALGSAKPLADVDLQLLAKNNEVLGTAKTDADGRAV
FSAGLMRGTAAQAPAILTARNGDNDYVFLDMTRAGFDLSDRGVTGRAAPGAIDVFSWTER
GIYRAGETVHAAALARDVDGKAIEDLPLTFIFSRPDGVEDRRFVSDGKALGGHAVDLPLQ
ANAMRGTWTLRIHTDPKTAAISEKSFLVDDFVPDRTEFDLSSKAKQIDPGAETAIDVDGR
YLYGAPAAGLTLEGEVAIKPTRTSADFEGYFFGLADEESEEENRTTLADLPALDEEGKAS
FNIDLTDLPSTTQLLSANITVRMREAGGRAVERSLTLPIKAEAPVIGIKPQFSGDLAQNS
VGRFHIIGVNADGAKQAMSGLNWKLIKVERNYQWYRQGNSWRYEPVEYTKQQEAGSLSVD
ANGGEISVPVTWGRYRLEVEGAGNGAPVSSVEFDAGFYVEASSTETPDALEIALDKQSYK
IGDKAKLKVSSRFAGELMVTSGSEKLIAVQNAEIGEDGGEIDIPVTEEWGAGAYVTATLF
RPGDAQESRMPMRAIGIKWLAVDPAERKLAVTLGAPQKTLPRQPLEIPITVAGAGVGEKA
YVIVAAVDVGILNLTRYEPPKPDEWYFGQRRLGLEIRDLYGRLIDGSLGATGRLRTGGDG
GQAALQGSPPTEKLVAFFAGPVELDADGKATVSFDIPQFNGTARIMAVAWTKTGVGHAVS
DAIIRDPVVVTASAPKFLAPGDVSQLRLDIANTDGEPGDYRLDVTSNTALTVDQGEMSQT
LALQKGGKSSLTVPLTGEQPGNGAITIKVSNAAGLSLEQVLNVPVRPAVLPVTTRREIKI
APNSSLTINGDLLADSMLLGSSVAVNVTRSPAFDIPALVMMLDKYPYGCAEQTTSRALPL
LYVSELTKDSGLAEDPDTRKRVQEAIYRVLSFQSSSGSFGLWSPGYGDLWLDAYISDFLT
RAREQNYDVPEAAMVQALNNLQNGLSYDSNVKDRGNEIAYSLYVLARNRKAAINDLRYYA
DTALADFATPLAKAQVAAALSLYGDQTRLKSVFGASLDMASRATNVSFARADYGSALRDG
AATLALAAESRPVPAVVPQLAGAVAKEWEKKPYTSTQEQAWMLLAARAVKGEDKDIRLDV
NGDLQTGGFGKRMSGDELLAAPLKIANASADPVTAVVTTVAPPAQPLAAGGEGFTITRTY
YSMDGEEVNPSEVVQNERYVVVLNVVPQNNWQSRILVTDLLPSGFEIDNPSLVNSAELSN
FDWLPETEAAHTEFRYDRFVAAFDRSAGDSSEIALAYVVRAVTPGTYDHPAASVEDMYRP
QFAARTATGRMEVRSANP
Download sequence
Identical sequences WP_078052014.1.63416

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