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Domain assignment for WP_080004491.1.59741 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_080004491.1.59741
Domain Number 1 Region: 2561-2804
Classification Level Classification E-value
Superfamily PMT central region-like 1.31e-56
Family PMT central region-like 0.0067
Further Details:      
 
Domain Number 2 Region: 3186-3305
Classification Level Classification E-value
Superfamily alpha/beta-Hydrolases 4.05e-23
Family Haloperoxidase 0.046
Further Details:      
 
Domain Number 3 Region: 4280-4486
Classification Level Classification E-value
Superfamily beta-Roll 0.00000000000000903
Family Serralysin-like metalloprotease, C-terminal domain 0.0029
Further Details:      
 
Domain Number 4 Region: 4195-4288
Classification Level Classification E-value
Superfamily beta-Roll 0.00000349
Family Serralysin-like metalloprotease, C-terminal domain 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_080004491.1.59741
Sequence length 4546
Comment RTX toxin RtxA [Vibrio cholerae]; AA=GCF_002098625.1; RF=na; TAX=666; STAX=666; NAME=Vibrio cholerae; strain=CISM_134; AL=Contig; RT=Major
Sequence
MVFYLIPKRRVWLMGKPFWRSVEYFFTGNYSADDGNNNIVAIGFGGQIHAYGGDDHVTVG
SIGATVYTGSGNDTVVGGSAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVS
IDHLGNHGDVSYGGAAAYNGITRKGLSGNVTFAGAGGYNALWHETNQGNLSFTGAGAGNK
LDRTWSNRYQGSHGDVTFDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQG
AGASNRIERTHQAEDVYTQTRGNIRFEGVGGYNSLYSDVAHGDIHFSGGGAYNTIIRKGS
GNDFAKEGMTNAKADEIVLTKAVMSGSWIGQDHHVTAVKSASEPNTYLFAFADSTYTKIN
KVQLRNDPQTGELKYYSTAWYKEVNHLSNLANQDISDNGGFTAVNINGAYTLSDLKVEHQ
QSVTVHAVEKSLTEYEWVTYANGAVIDAKEVSLSDAKMGGHAIYADGTKVDVKAVKSNRQ
PNTYIYAKVLGPYTKIVVVELANDPETGALKYQARSWYKEGDHTANIANQDISSATGYNP
MGKGGYSLSDLHYSVNAVRSTSETVADIEEYTDQTLFKPANDSGESSGDVRFNGAGGGNV
IKSNVTRGNVHFNGGGIANVILHSSQFGNTEFNGGGAANVIVKSGEEGDLTFRGAGLANV
LVHQSEQGKMDVYAGGAVNVLVRLGDGQYLAHLLAYGNISVQKGSGDSRVVMLGGYNTHT
QIGSGNGLWLAAGGFNVMTQVGKGDVAAVLAGGANVLTKMGEGELTSGMLGGANVITHIS
NDDQLSNTTAVALGGANILTKKGKGNTLAVMGGGANVLTHVGDGTTTGVMVGGANILTKV
GNGDTTGILLGVGNVLTHVGDGQTLGVMGAAGNIFTKVGDGTSIAVMIGAGNIFTHVGEG
NAWALMGGLGNVFTKVGNGDALALMVAEANVFTHIGDGMSVALMLAKGNVATKVGNGTTL
AAMVGNVNIFTHIGHGSTFAAMIGQANIMTKVGNDLTAALMVGKANIMTHVGDGTSLGLF
AGEVNVMTKVGNGTTLAAMFGKANIMTHVGDGLTGVLALGEANIVTKLGDDFMGVVAAAK
ANVVTHVGDATTAAVLAGKGNILTKVGEGTTVGLLISDVGNVMTHVGDGTTIGIAKGKAN
LITKVGDGLGVNVTWGQANVFTQVGDGDRYNFAKGEANLITKVGDGQEVSVVQGEANIIT
HVGNGDDYTGAWGKANVITKVGHGQNVVLAKGEANIVTQVGDGDSFNALWSKGNIVTKVG
DGMQVTAAKGQANITTTVGNGLNVTAAYGDANINTKVGDGVSVNVAWGKYNINTKVGDGL
NVAVMKGKANANIHVGDGLNINASYAQNNVAIKVGNGDFYSLAVASSNTSSNKLSALFDN
IKQTVLGVGGSQAINYLVQGDEASSSGTHKGRGAIATPEITKLDGFQMDAIKEVSSDLGD
SLTGSVTKVDTPDLNKMQHALNVDDSSVQAPNLIVNGDFELGEHGWQSTHGVEASYAGSV
YGVEGEGHGARVTELDTYTNTSLYQDLANLAQGEVIAVSFDFAKRAGLSNNEGIEVLWNG
EVVFSSSGDESAWQQKNLKLTAQAGSNRIEFKGTGHNDGLGYILDNVVATSESSQQANAI
REHATQNPAAQNALSDKERAEADRQRLEQEKQKQLDAVAGSQSQLESTDQQALENNGQAQ
RDAVKEESEAVTAELAKLAQGLDVLDGQATHTGESGDQWRNDFAGGLLDGVQSQLDDAKQ
LANDKIAAAKQTLSDNNSKVKESVAKSEAGVAQGEQNRAGVEQDIADAQADAEKRKADAL
AKGKDAQQAESDAHHAVNNAQSRGDRDVQLAENKANQAQADAQGAKQNEGDRPDRQGVTG
SGLSGNAHSVEGAGETDSHVNTDSQTNADGRFSEGLTEQEQEALEGATNAVNRLQINAGI
RAKNSVSSMTSMFSETNSKSIVVPTKVSPEPERQEVTRRDVRISGVNLESLSAVQGSQPT
GQLASKSVPGFKSHFASTSIGIENELSGLVVVLPKNSAQTFGYVHDSQGNPLFMLTKDMN
QGGYSNPVGINDIQGVNNWQTHTIELVTYPSEISDTAAVESRKEAMLWLAKEFTDHINQS
NHQSLPHLVSDDGRFTLVISNSKHLIAAGNGTSIDAQGKTIGMTPSGQQATMAISAKEFG
TSSSPEVRLLESAPWYQAGLRDEFLANAKNTTLDDPATAQNVYAYLTSVYSKTADLAKEY
GIYINDWDPASEGFSPNAQGLTDPKVKNAWSILPRTKPVRMLELLSAEDSRYVRQQIAEK
LKGTYSESLAKNVFEYFQYGGEVAGHGINNATTGSVQQPEPAILFEFRSVPSALSDFVPK
TASTVKVDVKALDHFDSASRKAIITEVNALVSGSEDFDAWYQEYRASKGQPPVKNPKSSA
SANHKAEWLMTQHAEQWAKITAPYTDNHETLTSTKLASNDKEELHALGETSNLENNKQQE
NVASIINTMLNDMLPFYALRTERNLLVQEGDEGFEVRAWPGTEDKSKTIILEDPEDAAQH
KAIERFILANFDNFEQMPDELFLVDNKVISHHEGRTHVLAQKVDGAWQYNATVELMSVTE
LLDAANVTGKIRGESYQQVIDALTDYHASITEHADYEPESVEKLLNLRKKIEGYVLGHPD
SGRVEAMNSLLNQVNTRLDEVSLLSVAEQTIQAQNSFSRLYDQLEAANLKESKHLYLDQN
GDFVTKGKGNLANIDLLGSREAVLEKVKLTVSNEYGQTVADTIFAGLSAKDLAKDGKGVD
IAGLNKVHQAIEQHLSPVSATLYIWKPSDHSALGHAALQIGQGRTQLEGQAAADFNQQNY
VSWWPLGSKSSNISNILNVATKDQPDLKLRWSDFSQPAHQNDTLEHDVASEENDGFGLHD
GDIKLKRFIEKLNAAKGIDASFKEASEGYASVLLGNPDMLETTSIPAHVFQPFVEQWNDT
SYDMMDVAHRFAQELRLQAQRSDDPELLEKRIGNVIRQFAERALEEIETFKASQADQGRV
FRINLEGLDVAAMQAEWHRLSNDPDARYQLLTKNCSSTVAKVLKAGGADKLIGHTWLPKF
GVWTPTELFNFGQALQEAQLEIAAKKQSHQVTDVLDALSGNEKPKENVAIENDGTPPRDK
ESLSPLTRFLNNELYGDKEARRKIGEITQTLLDHAVEKGESQKITLQGEAGRLTGYYHQG
TAPSEGETSSPSGKVVLFLHGSGSSAEEQASAIRNHYQKQGIDMLAVNLRGYGESDGGPS
EKGLYQDARTMFNYLVNDKGIDPSNIIIHGYSMGGPIAADLARYAAQNGQAVSGLLLDRP
MPSMTKAITAHEVANPAGIVGAIAKAVNGQFSVEKNLEGLPKETSILLLTDNEGLGNEGE
KLRTKLTASGYNVTGEQTFYGHEASNRLMSQYADQIVSGLSSSASVDEDLDQQGLDTTST
KDQGISNKNDHLQVVDSKEALADGKILHNQNVNSWGPITVTPTTDGGETRFDGQIIVQME
NDPVVAKAAANLAGKHAESSVVVQLDSDGNYRVVYGDPSKLDGKLRWQLVGHGRDHSETN
NTRLSGYSADELAVKLAKFQQSFNQAENINNKPDHISIVGCSLVSDDKQKGFGHQFINAM
DANGLRVDVSVRSSELAVDEAGRKHTKDANGDWVQKAENNKVSLSWDAQGEVVAKDERIR
NGIAEGDIDLSRIGVNNVDEPARGAIGDNNDVFDAPEKRKPETEVIANSSSSNQFSYSGN
IQVNVGEGEFTAVNWGTSNVGIKVGTGGFKSLAFGDNNVMVHIGDGESKHSVDIGGYQAL
EGAQMFLGNRNVSFNFGHSNDLILMMDKSIPTPPLVNPFDGAARISGVLQGIATSGEGED
WLAAQEQQWTLSGAKKFVKDMSGLDQSSSVDYTTLVELDSQNERDSRGLKHDAEATLNKQ
YNQWLSGNGNSGTSQLSRADKLRQANEKLAFNFAVGGQGADIQVTTGNWNFMFGDNIQSI
LDTNLGSLFGLMTQQFTATGQAKTTFTYTPQDLPRQLKNKLLGQLAGVGAETTLADIFGV
DYTASGQIVSRNGQAVDGVAILKEMLEVIGEFSGDQLQAFVDPAKLLDSLKAGIDMGADG
IKSFAETHGLKEKAPEEEKDNSSVSVNGANVNSAQGATVADGNTETAETQDRAFGFNSLN
LPNLFATIFSQDKQKEMKSLVENLKQNLTADLLNMKEKTFDFLRNSGHLQGDGDINISLG
NYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNIFTGGEGNDMGVLMGRENMMF
GGDGNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQD
YSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATA
ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID
WQKLWFERSGYDLKLSILRDPSNDSDQSKFEHIGSVTFSDYFNGNRAQVVIGMSEKDLSG
EREYTMLSDSAIDALVQAMSGFEPQAGDNGFIDSLESKSQAAISMA
Download sequence
Identical sequences WP_080004491.1.101220 WP_080004491.1.102054 WP_080004491.1.11270 WP_080004491.1.11879 WP_080004491.1.12332 WP_080004491.1.12527 WP_080004491.1.12548 WP_080004491.1.12686 WP_080004491.1.13155 WP_080004491.1.14080 WP_080004491.1.14904 WP_080004491.1.14995 WP_080004491.1.15109 WP_080004491.1.15786 WP_080004491.1.16351 WP_080004491.1.16382 WP_080004491.1.17232 WP_080004491.1.17295 WP_080004491.1.17621 WP_080004491.1.18392 WP_080004491.1.18447 WP_080004491.1.19128 WP_080004491.1.19503 WP_080004491.1.20107 WP_080004491.1.20379 WP_080004491.1.20404 WP_080004491.1.20602 WP_080004491.1.20699 WP_080004491.1.20758 WP_080004491.1.21073 WP_080004491.1.21281 WP_080004491.1.21558 WP_080004491.1.21764 WP_080004491.1.21815 WP_080004491.1.21866 WP_080004491.1.22773 WP_080004491.1.229 WP_080004491.1.22953 WP_080004491.1.2341 WP_080004491.1.23416 WP_080004491.1.23424 WP_080004491.1.23538 WP_080004491.1.23955 WP_080004491.1.240 WP_080004491.1.24399 WP_080004491.1.24980 WP_080004491.1.26156 WP_080004491.1.2627 WP_080004491.1.26326 WP_080004491.1.26508 WP_080004491.1.26580 WP_080004491.1.27186 WP_080004491.1.27435 WP_080004491.1.27639 WP_080004491.1.27863 WP_080004491.1.28431 WP_080004491.1.29095 WP_080004491.1.29535 WP_080004491.1.30360 WP_080004491.1.3054 WP_080004491.1.32814 WP_080004491.1.33811 WP_080004491.1.34634 WP_080004491.1.3514 WP_080004491.1.35201 WP_080004491.1.35630 WP_080004491.1.35881 WP_080004491.1.3635 WP_080004491.1.36686 WP_080004491.1.37999 WP_080004491.1.39514 WP_080004491.1.39853 WP_080004491.1.39933 WP_080004491.1.40039 WP_080004491.1.40470 WP_080004491.1.40484 WP_080004491.1.42498 WP_080004491.1.43335 WP_080004491.1.4365 WP_080004491.1.44569 WP_080004491.1.45055 WP_080004491.1.45127 WP_080004491.1.45264 WP_080004491.1.45842 WP_080004491.1.4661 WP_080004491.1.4730 WP_080004491.1.4731 WP_080004491.1.47796 WP_080004491.1.47942 WP_080004491.1.48128 WP_080004491.1.488 WP_080004491.1.49317 WP_080004491.1.50577 WP_080004491.1.50980 WP_080004491.1.51177 WP_080004491.1.5201 WP_080004491.1.52391 WP_080004491.1.5320 WP_080004491.1.55929 WP_080004491.1.56429 WP_080004491.1.56785 WP_080004491.1.57148 WP_080004491.1.57300 WP_080004491.1.57518 WP_080004491.1.58844 WP_080004491.1.58975 WP_080004491.1.59741 WP_080004491.1.59916 WP_080004491.1.60386 WP_080004491.1.60955 WP_080004491.1.61169 WP_080004491.1.61869 WP_080004491.1.61935 WP_080004491.1.62165 WP_080004491.1.62425 WP_080004491.1.63546 WP_080004491.1.63655 WP_080004491.1.6366 WP_080004491.1.63723 WP_080004491.1.63749 WP_080004491.1.64253 WP_080004491.1.64382 WP_080004491.1.65086 WP_080004491.1.68424 WP_080004491.1.68506 WP_080004491.1.68723 WP_080004491.1.68925 WP_080004491.1.69857 WP_080004491.1.7049 WP_080004491.1.70892 WP_080004491.1.71129 WP_080004491.1.72361 WP_080004491.1.7238 WP_080004491.1.72480 WP_080004491.1.73148 WP_080004491.1.73429 WP_080004491.1.73929 WP_080004491.1.74666 WP_080004491.1.75326 WP_080004491.1.76425 WP_080004491.1.76486 WP_080004491.1.77029 WP_080004491.1.7717 WP_080004491.1.77914 WP_080004491.1.79044 WP_080004491.1.8023 WP_080004491.1.80339 WP_080004491.1.80628 WP_080004491.1.80808 WP_080004491.1.8117 WP_080004491.1.81871 WP_080004491.1.82413 WP_080004491.1.83073 WP_080004491.1.83082 WP_080004491.1.83703 WP_080004491.1.84610 WP_080004491.1.85822 WP_080004491.1.85961 WP_080004491.1.85972 WP_080004491.1.87274 WP_080004491.1.87355 WP_080004491.1.87573 WP_080004491.1.87602 WP_080004491.1.88230 WP_080004491.1.88556 WP_080004491.1.89889 WP_080004491.1.90133 WP_080004491.1.90227 WP_080004491.1.90437 WP_080004491.1.90675 WP_080004491.1.92063 WP_080004491.1.92516 WP_080004491.1.92696 WP_080004491.1.92703 WP_080004491.1.92993 WP_080004491.1.93060 WP_080004491.1.93399 WP_080004491.1.94255 WP_080004491.1.94426 WP_080004491.1.9561 WP_080004491.1.95662 WP_080004491.1.95733 WP_080004491.1.9607 WP_080004491.1.96311 WP_080004491.1.96687 WP_080004491.1.96980 WP_080004491.1.97144 WP_080004491.1.97552 WP_080004491.1.97650 WP_080004491.1.9787 WP_080004491.1.98021 WP_080004491.1.98280 WP_080004491.1.98624 WP_080004491.1.99452 WP_080004491.1.99872

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