SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_001178522.1.5271 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_001178522.1.5271
Domain Number 1 Region: 7-347
Classification Level Classification E-value
Superfamily Cysteine proteinases 7.16e-113
Family Calpain large subunit, catalytic domain (domain II) 0.000000116
Further Details:      
 
Domain Number 2 Region: 355-496
Classification Level Classification E-value
Superfamily Calpain large subunit, middle domain (domain III) 9.42e-28
Family Calpain large subunit, middle domain (domain III) 0.00041
Further Details:      
 
Domain Number 3 Region: 520-633
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 9.04e-21
Family Synaptotagmin-like (S variant) 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_001178522.1.5271
Sequence length 642
Comment PREDICTED: calpain-5 isoform X1 [Strongylocentrotus purpuratus]; AA=GCF_000002235.4; RF=representative genome; TAX=7668; STAX=7668; NAME=Strongylocentrotus purpuratus; AL=Scaffold; RT=Major
Sequence
MGLFGNNVEFFKGQNYDQLRKAAQSSGSPFQDPEFPAADASLFHKRTSPGKIEWKRPGEL
TSDPHLVVDGTKSGDVSQGQLGNCWFVAATANLAQEKELWETVVPNAKDQDWDADNKEKY
AGIFHFRFWRFGKWTDVVIDDRLPTHGNKLIYTHSEEGNEFWSALLEKAYAKISGCYENL
DGGNTADALVDFTGGVAEQINLADPEFQADQNKKKELHSQMKKYSERRFQMSASIKVTNA
EEMEARTDVGLVKGHAYGVTAVKSVKLGSSGFFKKEKEYLVRLRNPWGEKEWNGPWSDGS
PEWQNISESQRKSIGIVNEDDGEFWMPFDQFCQHFTTLVICRMPNKTYLSLQRTWHESLF
ISEWKYNSNSVLNRAGGCINVKETFLQNPQFLICVDADKDDIIISLSQPDTRADQSEDPK
TIGFYVMEVESNRKHRAHTIKPKTFMSAYINSRSVFAKSTLLRGRYIVVPTIFEAKVESP
LMIRVFSDSGAEVKELKKDHPEPKTFDCFQGGNIRVVSQVNVLSASNLKKQDHFGGGADP
YVYVKCEGKTATSRVQKDTLNPEWNYNSIFYRRKPGTPIIVEVWNHNVVKDSFMGQAIFL
AGNKGQPEHNVAVLKKRGRDSEDAAGGQVSVVITTTDDLKAL
Download sequence
Identical sequences XP_001178522.1.5271 XP_011669725.1.5271

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]