SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_001311324.1.43485 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  XP_001311324.1.43485
Domain Number - Region: 252-431
Classification Level Classification E-value
Superfamily VPS9 domain 0.00222
Family VPS9 domain 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_001311324.1.43485
Sequence length 441
Comment hypothetical protein [Trichomonas vaginalis G3]; AA=GCF_000002825.2; RF=representative genome; TAX=412133; STAX=5722; NAME=Trichomonas vaginalis G3; strain=G3; ATCC PRA-98; AL=Scaffold; RT=Major
Sequence
MEENEFFFQYLQSHKKLVKFITAVTKGEEIGKSPNLSFEDYRQKIHQENVEKLQKFETKL
KRVNNKAYVQCMSKPAYIPPSFNFTYHKIRFLEDFINNYHNNIDKFVKRYVTEALPLFTV
ENMIPTLYLLVIDQKNLTKYVEKKKKKIKRLKDYHETLVDNLKKKLNVKFTLDNTIAALN
QILNTIHPSFDSSLAFFCPNPIQDSFEVLLFHPDIFCAEQVNKILTHFSKMSPTDFVFAI
VKFVEFVGKTIDKTDSFSLSALIGLCFRAFFDRVYPEVKLFMVPELSFDLIATLHDFTVA
EIEPPRACCPPLKDTDKIRDIFKNDAHFSLAVEQAEFISFFTNPLDILHHMYHALCEIEK
AAHVYGGNDSALMSFDVTFGLVLCVLLSADIPELMRIAMFTDQFTPETGLCPDFEFARAK
LSTASVHLQNKAQQKMSQMKQ
Download sequence
Identical sequences A2F9L3
84394.m00077 gi|121893129|gb|EAX98394.1| gi|123445122|ref|XP_001311324.1| XP_001311324.1.43485 5722.A2F9L3

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]