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Domain assignment for XP_001315378.1.43485 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001315378.1.43485
Domain Number 1 Region: 118-453
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.73e-38
Family WD40-repeat 0.013
Further Details:      
 
Weak hits

Sequence:  XP_001315378.1.43485
Domain Number - Region: 797-831
Classification Level Classification E-value
Superfamily Bromodomain 0.000536
Family Bromodomain 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_001315378.1.43485
Sequence length 856
Comment hypothetical protein [Trichomonas vaginalis G3]; AA=GCF_000002825.2; RF=representative genome; TAX=412133; STAX=5722; NAME=Trichomonas vaginalis G3; strain=G3; ATCC PRA-98; AL=Scaffold; RT=Major
Sequence
MNERLQEINFLVAKYLMSNFPDIGSQFISKCEKNELFPNRIFDTSQKFETLNTSTLSDIS
NDHLIKLIELSMPSSENNSFIFKKNPSSQIPISDQLLLGNMQPLTIPEKNSSSIEICAHF
ETISQILFDKTQQLLITGSSDSFIKIWHLPELHLVTTLSSHDNNITHIALNPQNSLLFST
GTDKTLCVFSMTDGAFRQRINLKANILDLCVSPNGNYLAASFDDGLTRVWRILQEKNKID
PNVEFNIHGSNITTKIVSVQFFNDDILMMTSELSEVISISLSKKKYFSKHCNEEGTVEAV
YASNGDILASLPKKKNLILISSKYRTFDYVLLPVYKEKLKVRGFAYNADESFIFAVSHSK
FIIFRREDFSVFSQCVIFEDEFLTCLAPHPKEPMIAFVGTNFGNAAVLDLNSYKKVQLFS
MKSNSKVALAKWSDDGNHLAFCDDLGNLILYGIECEKVVLREQFMGKELNLNSNDSKVFD
GTGNPVEPQPPSFKLQNMKLNLSIKPGNTISNAEIDISDWIDFNSNDKIWYCSKTEALRI
PVVNTSPQKPEKKYNIFLNNDSSENDNGNTESDEEVTSLPQWTYQTKQEQHFYIPQVGEE
IVYFRQGHQFASRLFNDAQLRKPYEYKPSMPRTAFGQIIAAKFAITHFILTIAFHNMSNL
VCDIPFHLPDSVPFIVPLWIYKESLNFISKLRVGSTVFIPYLEDDGLKHYEAMIEEFAPD
ISNNPFESITVGFVEGGDQAKVSPWEIELDDLKPPETIISKIQENLLETVDKLIEMYPVY
HKVRYSNIDDILLLASQQPMDLSLFRDRIENKWYYTIEELTKEAGLFGQNAGLIGIPEDI
GNQITRMIRTEISRKI
Download sequence
Identical sequences A2EW07
XP_001315378.1.43485 92210.m00100 gi|121898053|gb|EAY03155.1| gi|123455264|ref|XP_001315378.1| 5722.A2EW07

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