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Domain assignment for XP_001365187.1.35504 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001365187.1.35504
Domain Number 1 Region: 550-709
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 1.62e-44
Family Ypt/Rab-GAP domain of gyp1p 0.0083
Further Details:      
 
Domain Number 2 Region: 684-807
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 5.23e-30
Family Ypt/Rab-GAP domain of gyp1p 0.0051
Further Details:      
 
Domain Number 3 Region: 123-272
Classification Level Classification E-value
Superfamily PH domain-like 3.2e-26
Family Phosphotyrosine-binding domain (PTB) 0.015
Further Details:      
 
Weak hits

Sequence:  XP_001365187.1.35504
Domain Number - Region: 995-1029
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 0.0602
Family Trimerization domain of TRAF 0.0089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_001365187.1.35504
Sequence length 1066
Comment PREDICTED: rab GTPase-activating protein 1 isoform X1 [Monodelphis domestica]; AA=GCF_000002295.2; RF=representative genome; TAX=13616; STAX=13616; NAME=Monodelphis domestica; AL=Chromosome; RT=Major
Sequence
MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQL
QKELEDVLMDPPMEDGDKEHMERTQIDGEGDGPLVNELSTSSTINPVSLAGLQKPEMSLP
VKPGQGDSEESSPFTPVADEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRGQCQISL
DVTLSVPNVSEGTVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNAEL
FRIHVFRCEIQEAVSRILYSFATAFRRSAKQTLLATAAPQTSDSDIFTFSVSLEIKEDDG
KGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTSNKELIIERCFGLLLSPGKDVRNSDMH
LLDLESMGKSSDGKSYIITGSWNPKSPHFQVVNEETPKDKVLFMTAAVDLVITEVQEPVR
FLLETKVRVCSPNERLFWPFSKRSTTENFFLKLKQIKQKDRKSNTDTLYEVVCLESESER
ERRKTTASPSLRLPQSGSQSSMIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILETWGE
LLSRWHLNLSVRPKQLSSLVRSGVPEALRGEVWQLLAGCHNNDHLVEKYRLLITKESPQD
SAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMP
EEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEAHMY
ASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTSKDDLLLTDFEGALKFF
RVQLPKRYRSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIERFERENR
RLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEEEKR
RLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQSVNKAEIEKIW
HKVDDCERCREFFNKEGRVKVISSATEASDEDTDEEKETLKNQLREMELELAQTKLQLVE
AECKIQDLEHHLGLALNEVQAAKKTWFNRTISSIKTVTGVQGKETC
Download sequence
Identical sequences F6X4Q7
XP_001365187.1.35504 XP_007474682.1.35504 XP_016286176.1.35504 ENSMODP00000024627 ENSMODP00000024627

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