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Domain assignment for XP_001373115.1.35504 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001373115.1.35504
Domain Number 1 Region: 352-404,433-637
Classification Level Classification E-value
Superfamily Clavaminate synthase-like 1.4e-39
Family PhyH-like 0.079
Further Details:      
 
Domain Number 2 Region: 65-179
Classification Level Classification E-value
Superfamily ARID-like 1.96e-30
Family ARID domain 0.0007
Further Details:      
 
Domain Number 3 Region: 287-349
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 2.44e-17
Family PHD domain 0.002
Further Details:      
 
Domain Number 4 Region: 1138-1221
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000000000266
Family PHD domain 0.0079
Further Details:      
 
Domain Number 5 Region: 1601-1665
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000000031
Family PHD domain 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_001373115.1.35504
Sequence length 1689
Comment PREDICTED: lysine-specific demethylase 5A isoform X4 [Monodelphis domestica]; AA=GCF_000002295.2; RF=representative genome; TAX=13616; STAX=13616; NAME=Monodelphis domestica; AL=Chromosome; RT=Major
Sequence
MAGAGPGGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPP
FACEVKSFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYAL
SKIVASKGGFEMVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
VQMPNLDIKEKVEVEVLSTDAQASPEQGTRMNILPKRTRRIKSQAETGEVSRNTELKKLQ
IFGAGPKMMGLAIGAKDKEDEVSRRRKGTRSEAFNMQMRQRKGTLSVNFVDLYVCMFCGR
GNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVREY
TLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVIVEYGADISSKDFGSG
FPVKDGRRKMMPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFC
WHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIMN
PNVLMEHGVPVFRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNH
YRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKEMTLMTEEETRLRESVIQMGVLLS
EEEVFELVPDDERQCSACRTTCFLSALTCSCNPDRLVCLYHPADLCPCPMQKKCLRYRYP
LEDLPSLLYGVKVRAQSYDTWVSRVTEALSASLNHKKDVIELRVMLEDAEDRKYPENDLF
RKLRDAVKEAETCASVAQLLLSKKQKHRQSPESGKTRTKLTMEELKAFVQQLFSLPCVIS
QARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQA
RWLDEVRLTLSDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKV
CLQARPRHSMSSLESIVNEAKNIPAFLPNVLALREALQRAREWTAKVEAIQNGSNYAYLE
QLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDIG
VYGSSKNRRKKVKELMEKEKEKDLDLDPLSDLEEGLEETRDTAVVVAVFKDREQKEIEAM
HSLRAANLAKITMVDRIEDVKFCICRKTASGFMLQCELCKDWFHSSCVPLPKTSSQKKGS
SWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRAR
QALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLPGFQQSAF
NRVVSSVSSSPRQTVDYDDEETDSDEDIRETYGYDIKDTASVKSSSSLEPNLFCDEEIPI
KSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLESPVLELSAGA
KAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHVMEDDSMEEKPLRIKGKDS
SEKKRKRKLEKVEQLFGEGKQRSKELKKLDKPKKKKLKMNVDKSKELNKLAKKLAKEEER
KKKREKAAAAKVELVKENTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCKD
KVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPSSPGQAQPPSFIMSYKL
PVEELKEAS
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Identical sequences XP_001373115.1.35504

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