SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_001558142.1.26476 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_001558142.1.26476
Domain Number 1 Region: 204-285
Classification Level Classification E-value
Superfamily tRNA-intron endonuclease catalytic domain-like 3.66e-23
Family tRNA-intron endonuclease catalytic domain-like 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_001558142.1.26476
Sequence length 305
Comment hypothetical protein BC1G_03174 [Botrytis cinerea B05.10]; AA=GCF_000143535.1; RF=representative genome; TAX=332648; STAX=40559; NAME=Botrytis cinerea B05.10; strain=B05.10; AL=Scaffold; RT=Major
Sequence
MSPSFVPEPVAISFIAGRYLLFDIDVVTHLRRTYHICGVLTGTIPQIPQQNLFLGLPVEL
LPEEAKVLVDKKIAYIVEDTPWHKQNFSSLEGLDRKKYLESLKTEAFKAKKAADTEARKR
TENALAKKALKGGSGSLPSTSRPSNDPTDDTISNESDPLFEDERPASRASSVAPLSTKSW
GITPTVSYPSSPSPQTFPSSPDPSVPSSYPLFAHLHSRDYFMTPGLRFGCDYTVYPGDPL
RFHSHFVATGYEWDEEIRLLDIVGGGRLGTGVKKGFLIGGENPQKKAAEKENDGVRTFCI
EWGGM
Download sequence
Identical sequences XP_001558142.1.26476 332648.A6RSE7 BC1T_03174

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]