SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_001616061.1.43797 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_001616061.1.43797
Domain Number 1 Region: 2-102
Classification Level Classification E-value
Superfamily ARID-like 1.31e-17
Family ARID domain 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_001616061.1.43797
Sequence length 2313
Comment ARID/BRIGHT DNA binding domain containing protein [Plasmodium vivax Sal-1]; AA=GCF_000002415.2; RF=representative genome; TAX=5855; STAX=5855; NAME=Plasmodium vivax; AL=Chromosome; RT=Major
Sequence
MERGEFYRKYQEYYESDISQIPPLIEGMGIELYDLYLSVLSHGGYSCVSRNSKWIKIARE
FGLINKEKNIKLIEDIKCIKEYYLTYLREFERIHDNLKKGKVSPKKLRAGKTPSSVDVRY
NKKMSVSKANNKKLKTETHMHNLRRPEQLTGVSIPGGMVHPGVINNVEHLMGSAKGSCKT
LHPYGSNGNVNPTYVDVYNVTPSAKLWKDNLHQKGSAYCLEDYLDGSAPWYGGDSMQTQM
SMGSSPVERSKSKSSHKKGLTKKRSFKTEGDFADADMRPMRLADVNLASYGAYANYANYA
NYANGGGVISGGGYLNYAGYPNSAGYPNCAGYPNCAGCPNCAVYPNYHVGSFHEVNGGAG
GYYSYGGELPYAVAATGEPSSYVDASSMGRGKYLCSNQVVSLNEVAAVGRGELIRGELNR
GELGRGELGRADLSRSDLSRSANMGNYFFHYGSVGLVGTPHSIENSLEGYNCVSTPPRGG
IVSSSMGAYIGSGVHSANGGARQGVNYGVNYGVNYGCNYGSNFGSNYGVNYGCNYGGEQY
QGYYYPPYDGNVKWNPFAGNPNEKLMVGAGSQANLLALEGYPGSLPYGLQIRNDSNIDAR
NCTDIYRILFGLKRRKEKVADFIFCLNVLYSLSAMNDLSLSRMQIRITICMLLQVLDEML
IIFYSKVSMKERALDIMVKSFADYLSDRNGWAPGKGLTSVRGDDYTGLAATAEGEHLMGC
AVCSSPGGDSLDCSGGNAPKGSPQGGRSAIMGALLSEQVNVSEIARLYLSYSGYCRDKRR
KIRRAGGSEGGSKGGRSEVNHSVEANRSAEANRSVEATPSGEESAGEGTSSPDGGSDWEE
APPWSSNPPSSVNSSDIENIITGGTTTKGGGNQSADSLYRDKEESKKSLMRKSSQEFVFL
ILYIINNIFQTRKYSLYFCNKKSDDVREGSLGEERDIVEASRGRGTTHAGGAFNKMDSGM
VRENLKREKALGGNSTCDDMPEETKMNELGRGSQGSEKINVDEGGGKDDGGGGGHLLSGR
TAEKEFWSDDSSDSASGCSVCSCKGGVVKKEVAPSRGMTRGYAKILSVKKKMMEGGGDLL
GEDALVRVKAQGDEEETTTNLCDRGGAADGGGWTGQVATAALLKGDANGPSEGAAWPNGE
TNACDKLKSSHLSSVGGYSPPPSSEVPPIREEGSSSLQTANFSMPQSEEPFMADDRPPHV
GSVPNGDVTQQVRDDVDLEKAQGVGCTRERLYPEGGSLCDSNFPSNGSSDAPNGSADGKG
LLIRQNNEAVCGDDGFAKEMKVKVMVKEEEGATIGVVGERTDDPPVQKDNEDGATPNGGS
GVGMQLHPLEGATTSSSHHLSDNRSAENYGRGGEHKCDDVALSHVVNKNGGEESSPRQMS
KSNYGGYPHPGMVEGMMQSGNDPLLVGGMYNMTSHVIPMGGSPVGGEQFERTYNGQGDGI
PFGGSPFSGSPFSGSPYGHDFPANHDGVISSLYYAPNGDDGRNGHSRGDHQMRKQEGATT
TQKETIRKENNLLVSAECGSPNGKIHEEEKICKKCGTARAHTSKRDGKRDNWQDSTQDGE
QNHKQEMKRLFKNMKREVYEEMKKIFKEKKIKQNKLLHYFDISKFLSIFELIFLKNFENI
IFHEKAIQNIYLNMFICVDILNNELGRSISLKYIFFPSQFLQRTSKLKITAHFDRKNKLF
IQSEARTGGSREFYHPGDAHSGDTHFGGNTERENLREDKINCFPSHLEGDPNGENVAHNG
AAKTAEKVEREETEAPPGMGGGTDQLSGMEYRKKIKKLFLKIFRRNNKKYNIYKKIDYEF
LMRKYKYRGPLNCEEKEKFKKYIILDLHEITKKILLKVYKRVNSHLNIAILSLNILTHIL
YLIPKRMLHVSFIFWILNETINVKCTYTYLSVPLCILNYNGFLFLETMMKLIIRMIENDV
MPLHSYMLSFLRLCSFPLYIYLYFDIPVSHTLIITALSALYLLVTYDPDFLATGFVSAKT
GGVRSSMGSCVRGGDDAAPGEGAASADHVCKKRRLSDLPAPGEDCGAISGERNGERSGEN
IGDYTGECPGDCGGEVKSEVKCHVKCQVKHEVKREGAQEEPRETAHEELTEERKELLEKI
FIKTMLLFLKKSIYFKSIFNCANINEKEEMLVDSRRVQVILKNWRMHSEEMEKEKEELYF
SNIENKVFYLHDNLLLYALDNLPISSPAKDMKMCENIKNQFINQYCTTVAFSYDFVMSEN
TEVQRLSIYAHSIVPIFLFLSSHRILWQCLSPHIPLLTQMAFIQTDISRSLWVILKEYYF
RSFMREKRSGKKLDSCFDSRLVKIERVKRNVAR
Download sequence
Identical sequences A5K1N4
gb|PVX_113345 gi|156100735|ref|XP_001616061.1| XP_001616061.1.43797 5855.PVX_113345

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]