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Domain assignment for XP_002308674.2.11743 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002308674.2.11743
Domain Number 1 Region: 37-175
Classification Level Classification E-value
Superfamily TRAF domain-like 8.18e-32
Family MATH domain 0.0034
Further Details:      
 
Domain Number 2 Region: 383-514
Classification Level Classification E-value
Superfamily TRAF domain-like 1.11e-26
Family MATH domain 0.0021
Further Details:      
 
Domain Number 3 Region: 212-357
Classification Level Classification E-value
Superfamily TRAF domain-like 1.6e-23
Family MATH domain 0.0049
Further Details:      
 
Domain Number 4 Region: 541-654
Classification Level Classification E-value
Superfamily TRAF domain-like 0.00000000000000229
Family MATH domain 0.0083
Further Details:      
 
Weak hits

Sequence:  XP_002308674.2.11743
Domain Number - Region: 894-1080
Classification Level Classification E-value
Superfamily ARM repeat 0.0278
Family GUN4-associated domain 0.054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_002308674.2.11743
Sequence length 1649
Comment hypothetical protein POPTR_0006s27250g [Populus trichocarpa]; AA=GCF_000002775.3; RF=representative genome; TAX=3694; STAX=3694; NAME=Populus trichocarpa; AL=Chromosome; RT=Major
Sequence
MTTTTTSTIDDITVGTTLDGTNGAAAETVTIDRRGEYSATCKWTVQSFPRVKARALWSKY
FEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLSIVNPLDDSK
TIHRDSWHRFSSKKKSHGWCDFTPASTVFDSKLGYLFNNDCVLITADILILNESVSFMRD
NSSSSTSNNEVQSGVSLSISSNSVAVGPVSDVLSGKCTWKVHNFSLFKEMIKTQKIMSPV
FPAGECNLRISVYQSSVNGTDYLSMCLESKDTEKTVVSDRSCWCLFRMSVLNQKAGGSNH
VHRDSYGRFAADNKSGDNTSLGWNDYMKMADFIGAESGFLVDDTAVFSTSFHVIKEFSSF
SKNGGLIGGRIGSGARKSDGHMGKFTWRIENFMRLKDLLKKRKITGLCIKSRRFQIGNRD
CRLIVYPRVFLEVTDLRNTSSDWSCFVSHRLSVVNQRMEEKSVTKESQNRYSKAAKDWGW
REFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSIMQDFTDQDTESTNGTSQIDKVGKR
SSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQSVGSDPD
KNFWVRYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDMLETDAGFLVLASEDD
QDALTTDPDELIDSEDSEGNSGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDA
GAIAGFLTGLRVYLDEPAKVKKLLLPTKLSGGNDGKKAAKADESSPSLMNLLMGVKVLQQ
AIIDLLLDIMVECCQPLEGSSNDDSSDAHSKPSLDGSGAASPLESDRGSGATESAQFPVH
ERLDSGLDDSKRASAVQSSDINGTDMPGQALPGQPIYPPVTTAGGALENASLRSKTKWPE
QSEELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKIALVLDKAPKHLQPDLVSLIPKLV
EHAEHPLAAYALLERLKKPDAEPALWIPVFGALSQLECGSDVWERVLIQSFDLLADSNDE
PLAATIDFIFKAASQCQHLPEAVRSVRTRLKNLGADVSPFVLDFLSRTVNSWGDVAETIL
RDIDCDDALGDSCSTLPCGLFLFGENASAAERLHVVDEQTFHFRCHFSDIYILIEMLSIP
CLAVEASQTFERAVARGAIMAQSVAMVLERRLAQRLNFNARFVNENFQHTDAIIEEEASE
QLRVQRDDFSVVLGLAETLALSRDLCVKGFVKMLYTILFKWYANETYRGRMLKRLVDRAT
STTDNSCDVDLDLDILAILVCEEQEIVKPVLSMMREVAELANVDRAALWHQLCASEDEII
RIRDERKAENSNMAREKANLSQKLSDCEATNNRLKSEMKAEMDRFTREKKELSEQIQEVE
SQLEWLRSERDDEITKLTVEKKVLQDRLHDAETQLSQLKSRKRDELKMQLFYCATSDHVA
FLWRNVLEIKVVKEKNALAERLKSAEAARKRFDEELKRYATENVTREEIRQSLEDEVRRL
TKTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASVQDEMTRHAPLYGAG
LEALSMQELETISRIHEEGLRQIHALQQCKGSPASSPHVSPHTLPHNHGLYPAAPPPMAV
GLPPLIPNGVGIHNNGLVNGTVGPWFNHT
Download sequence
Identical sequences Q0ZCE4
XP_002308674.2.11743 POPTR_0006s27250.1|PACid:18213355

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