SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_002309460.2.11743 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_002309460.2.11743
Domain Number 1 Region: 62-785
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.72e-276
Family Motor proteins 0.0000000000251
Further Details:      
 
Domain Number 2 Region: 788-885
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000000655
Family Motor proteins 0.069
Further Details:      
 
Weak hits

Sequence:  XP_002309460.2.11743
Domain Number - Region: 8-38
Classification Level Classification E-value
Superfamily Myosin S1 fragment, N-terminal domain 0.00628
Family Myosin S1 fragment, N-terminal domain 0.01
Further Details:      
 
Domain Number - Region: 982-1050
Classification Level Classification E-value
Superfamily Tropomyosin 0.00785
Family Tropomyosin 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_002309460.2.11743
Sequence length 1522
Comment hypothetical protein POPTR_0006s23660g [Populus trichocarpa]; AA=GCF_000002775.3; RF=representative genome; TAX=3694; STAX=3694; NAME=Populus trichocarpa; AL=Chromosome; RT=Major
Sequence
MPEPKMNLRKGSKVWAEDKNLAWVAAEVTDFLAKKVQILTVTGKQVLTVPEKLCPRDADE
EEEHGGVDDMTKLTYLNEPGVLYNLQRRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMM
EQYKGAPFGELSPHVFAVADASYRAMMSEGRSQSILVSGESGAGKTETTKLIMQYLTFVG
GRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDATGRISGAAIRTY
LLERSRVVQITDPERNYHCFYQLCASERDAEKYKLDNPHHFHYLNQSKTYELDGVSNAEE
YIKTRRAMDIVGISNEDQEAIFRILAAILHLGNIEFSPGKEHDSSTVKDEKSSFHMQMAA
DLFMCDANLLFATLCTRTIQTREGNIIKALDCNAAVASRDALAKTVYARLFDWLVEKINR
SVGQDPTSLIQVGVLDIYGFECFKYNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRKEE
INWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQNFRAHPRLEKA
KFSETDFTVSHYAGKVTYQTDTFLDKNRDYVVVEHCNLMLSSKCHFVAGLFPLPPEESSR
SSYKFSSVASRFKQQLQALMETLNSTEPHYIRCVKPNSMNRPQKFENLSILHQLRCGGVL
EAVRISLAGYPTRRSYTEFVDRFGLLAPEFDGSCSYDEKTWTKKILHKLKLDNFQLGRTK
VFLRAGQIGILDLRRAEVLDGAAKRIQRQLHTFIARRDFFSTRAAAFAIQSYCRGCLARK
MFAAKRERAAAISIQKYVRKWLLRRAYLKLLSAAIFMQSNIHGFLTRKRFLQEKKQRAAT
LIQARWKIYKFRSALRHRQASIIAIQCRWRQKLAKRELRRLRQEANEAGALRLAKTKLEK
QLEDLTWRLHLEKRLRVSNDEAKSVEISKLRNTVSSMSLELDAAKFATINECNKNAVLLK
QLELTVNEKSALERELVVMAELRKENALLKSSLDALEKKNSAIELELIEAQTNGNDTTVK
LQEIEEKCSQFQQTVRSLEEKLSHLEDENHVLRQKALTPSSKSNRPGFVRAFSEKYSSAL
ALAHSERKSAFESPTPSKLIVPSMHGLSESRRSKFTAERHQENYEFLSKCIKEDLGFIDG
KPLAACIIYRCLLHWHAFESERTAIFDYIIEGINEVLKVGDENITLPYWLSNASALLCLL
QRNLRSNGFLTAAVPSSTSSGLSGRVIHGLKSPFKIMGYEDGLSHVEARYPAILFKQQLT
ACVEKIFGLIRDNLKKELSPLLGLCIQAPKSARHAGKSSRSPGGIPQQAASSQWESIIKF
LDSLMDCLRENHVPSFFIRKLITQVFSFVNISLFNSLLLRRECCSFSNGEYVKSGLAELE
KWIVVATEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLQEIMQDLCPALTVRQIYRISTM
YWDDKYGTQSVSNEVVAQMREMLNKDNQNMTSNSFLLDDDLSIPFSTEDIDMAIPVIDPS
SVELPKLLTEHPCAQFLVLCQT
Download sequence
Identical sequences B9HCR5
XP_002309460.2.11743 POPTR_0006s23660.1|PACid:18211912

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]