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Domain assignment for XP_002436049.1.51680 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002436049.1.51680
Domain Number 1 Region: 11-429
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 6.02e-74
Family Integrin alpha N-terminal domain 0.00000363
Further Details:      
 
Domain Number 2 Region: 746-851,878-1009
Classification Level Classification E-value
Superfamily Integrin domains 3.5e-36
Family Integrin domains 0.0022
Further Details:      
 
Domain Number 3 Region: 604-731
Classification Level Classification E-value
Superfamily Integrin domains 5.13e-19
Family Integrin domains 0.00066
Further Details:      
 
Domain Number 4 Region: 429-603
Classification Level Classification E-value
Superfamily Integrin domains 5.75e-19
Family Integrin domains 0.0076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_002436049.1.51680
Sequence length 1056
Comment integrin alpha-ps, putative [Ixodes scapularis]; AA=GCF_000208615.1; RF=representative genome; TAX=6945; STAX=6945; NAME=Ixodes scapularis; strain=Wikel colony; AL=Scaffold; RT=Major
Sequence
MPSFCLPSSRLLVGAPRAQTSQPGTNRSGAVYKCPMTTWLQDCKQIPIEEEKTDSPTWLR
VTDAFFFFFSFSCLAAPENTILKDDQWLGVTVRSQGPGGYVLACAHRHVSMGPSYRWGRG
ICYSLTQYLDLERAWEPCENRPVDKAHEQFGFCQAGTSGVISEDSTIVLGSPGPYTWKGT
IFTISAKRLLKDWVWNVSPFLEEDAPVEKYSYLGMSVTSGRFFHNQTTFVAGAPRSNGTG
KVVFFDKDKASTKLHTALILDGEQFASSFGYSLTSLDLNSDGFIDLVVGAPFYHGKGEGG
AVYIYMNSKTGISKATKPIKLVGKDESRFGFGLSSTGDLNKDGFPDLAVGAPYEDGGGAI
YIYLGSADGIVKEPSQVIRPSDLPKPLSSKLTTLGYSLFGGMDLDSNGYPDLLSGNYESD
SVILFRSRPIIDISTSVKGKLTNIDPTVPGCPEDLRSPYVCFSFEACFQFSRTTQSASLR
NGTDNRLQLEYRIEAETFTGKKYYRVRFNASADSDTPNVVTRELELQWWTLGREHCSREL
VYLKDKSDIQSPIKMKLMYKLVQKEPRYPVEGAGLPDIDRLPILNQKEASKVFEARFLKN
CGSNDICESDLHVEADLILPKEAGGVPVLYLGEEHINMSIKVHNRGEPAYDAALYVFHPS
VLSYVGRKLISSGTDVVDCVPLESYVKCELGNPLNQGTLEIFLRFNARSEADAETSLNFI
ISANTTSLELSPQRDLDIDVNVVRVAELELRGATKPEQVWYGGVVVGAHAMKHFDEHSKP
FLRCHCQQVFNHGPWTVPTLDVVVSWPYEAENEQKHGKYLLYMTEEPKVVGDGECRMLEG
QVNPLGLKVSSSSCKKLFECTNLNCSLISFPPFQHRPAPASLSRSRSREKREVVITPEEV
RLEGKTVRLVTMKCDRGSAKCFKFRCTIRNLKKQLSATITINARLWNATLVEDYAAVDQV
SIFSSAEIELDPSLEVRQRPEDDFAHAETRAYPDASLYQKSEGVALWIIILAVCAGILLL
LLVIFLLYKLGFFKRKRPAEGYSPAPTSDKDFNGSS
Download sequence
Identical sequences B7PQK7
6945.ISCW005672-PA XP_002436049.1.51680 ISCW005672-PA

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