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Domain assignment for XP_002455953.1.57931 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002455953.1.57931
Domain Number 1 Region: 444-554
Classification Level Classification E-value
Superfamily TPR-like 1.06e-25
Family Tetratricopeptide repeat (TPR) 0.0012
Further Details:      
 
Domain Number 2 Region: 206-379
Classification Level Classification E-value
Superfamily TPR-like 6.17e-25
Family Tetratricopeptide repeat (TPR) 0.013
Further Details:      
 
Domain Number 3 Region: 579-662
Classification Level Classification E-value
Superfamily Thioredoxin-like 0.000000000000114
Family Thioltransferase 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_002455953.1.57931
Sequence length 681
Comment TPR repeat-containing thioredoxin TTL1 [Sorghum bicolor]; AA=GCF_000003195.3; RF=representative genome; TAX=4558; STAX=4558; NAME=Sorghum bicolor; cultivar=BTx623; AL=Chromosome; RT=Major
Sequence
MSEADRIRHRTAALALHDDEVRDKPDAKANVFADLGSPVSPLRARASVATSSSSSSGSAK
SPAPSNAGMAGGRSHSGELVGECNPPRLMAHRRSGSGQLIFSGSSSSRGSGGGDRGSTAS
SPMLNALPTGNICPSGRVPATAGAPPPPRSRPDVLGSGTGHYGHGSIMRGAGMAPARSSI
DSSSFLGHSSRSPVSFPASSGSLQEVTRLGNEWYKKGKYGEALRHYERAVALCPESAACR
GNRAAALIGLGRLADALRECEEAVRLDPVSGRAHSRVAGVCLRLGVIDKARRHFTQAGHL
QQSDPAEWQKLQEVEMHLGRCTDARKIGDWKSTLREADAAIAAGADSSQLLLALRSEALL
RLHKLEEAESTLGSMLKLDGALPSSLTAAKLSGMLAESYVHIVRAQVDMALGRFDTAVAA
AEKARDLDPGNAEIGMVLNNVRLVAKAREQGNDLFKAAKFSDASMAYGEGLKYDPSNSVL
HCNRAACWSKLEKWEKAVDDCNEALRIQPNYTKALLRRAASYAKLERWVDCVRDYEVLRK
ELPSDKEVAEALFHAQIALKATRGEDVSNMKFGGEVEIVSNVEQLRAAISSPGVSVVYFM
SAMNQQCTQITPSVNTLCTECPSVNFLKVNVDSSPMVAKAENVRIVPTFKIYKGGVKVKE
MICPSLHVLRYSVRHYSVSSS
Download sequence
Identical sequences C5XR15
XP_002455953.1.57931 jgi|Sorbi1|5036241|Sb03g027890 4558.Sb03g027890.1

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