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Domain assignment for XP_002591901.1.56174 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002591901.1.56174
Domain Number 1 Region: 582-733
Classification Level Classification E-value
Superfamily C-type lectin-like 2.7e-30
Family C-type lectin domain 0.0013
Further Details:      
 
Weak hits

Sequence:  XP_002591901.1.56174
Domain Number - Region: 549-592
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.000208
Family Pentraxin (pentaxin) 0.065
Further Details:      
 
Domain Number - Region: 342-372
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.00471
Family Pan module (APPLE domain) 0.074
Further Details:      
 
Domain Number - Region: 251-288
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.0196
Family Hairpin loop containing domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_002591901.1.56174
Sequence length 789
Comment hypothetical protein BRAFLDRAFT_89421 [Branchiostoma floridae]; AA=GCF_000003815.1; RF=representative genome; TAX=7739; STAX=7739; NAME=Branchiostoma floridae; strain=S238N-H82; AL=Scaffold; RT=Major
Sequence
MDPDGIALTVGITHIMSVPGRERPSKSDTNTDNKRARQTTAGEDIFPPNCGMVDVYEEAW
VPPDTAPGTKGNYEQACDVRLAFKPENGNQRKQRDSFSAAKLRSTEGADSRAGGSDGNTQ
VNEIYGVCNTDHTTDSTDTEDMADSVPGRPSSKRRRSGCWILAAIGLCALVGLTVAAMAQ
YHRAADSTEPLLESINKQLEANGKALQDVLLTLKMGKLRGDMPHPYMVKNSAELLPAVDG
YSVRQGSCPGNDIPSISEDGTTLEDCAVRCTNHPGCVAFTFTDNHRCFPKTKTCTKMRKT
PVMNMFYDKKSDGPRVVNGYTVRQGYCSSFGDNLGSISGTGITLQDCAQHCDTRPDCAAF
TVITNKTCSPMSKPCADPTNPTSLFYEKETVCKIKATNNIYRYRWDLPPLTTSPFRFDVK
ASHDIHIALAQDMNQMYEIVIGGWRNQKSVIRREKQGQIKVKARTPGIASPALFQTFSIQ
WAADGTISVSKVPGTAPFMSWRDPAPLSIHHVGYTTGFGSSDAVWKFCSNKTNQPKFQVA
HKLIGITEHRARFPLLVGYNGKVSKPFSGQLSCLQVYDYALTQKQITAAMHKCQVNEIVC
DPSWHRHGSRCFRIFSVAVPYAEAKAMCARHNSRVALPKDLPTNNFLVQLRNKVNKTLPT
WIGLKDEEEEGKHVWEDGEELGRFRAWGPGEPNNQPGDSDCVRIEKATGFIGANKWRDFP
CTLGTFGVICEKGKSRWVWTGREKQDIPSSRCRSFLIPQSTGRENAYHRPYHNMQGPCTR
KLGFICKKG
Download sequence
Identical sequences C3ZHW8
XP_002591901.1.56174 7739.JGI89421

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