SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_002601810.1.56174 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_002601810.1.56174
Domain Number 1 Region: 158-309
Classification Level Classification E-value
Superfamily PHM/PNGase F 2.35e-46
Family Peptidylglycine alpha-hydroxylating monooxygenase, PHM 0.00059
Further Details:      
 
Domain Number 2 Region: 309-454
Classification Level Classification E-value
Superfamily PHM/PNGase F 6.54e-39
Family Peptidylglycine alpha-hydroxylating monooxygenase, PHM 0.0017
Further Details:      
 
Domain Number 3 Region: 25-137
Classification Level Classification E-value
Superfamily CBD9-like 0.00000000000196
Family Cytochrome domain of cellobiose dehydrogenase 0.0053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_002601810.1.56174
Sequence length 473
Comment hypothetical protein BRAFLDRAFT_215350, partial [Branchiostoma floridae]; AA=GCF_000003815.1; RF=representative genome; TAX=7739; STAX=7739; NAME=Branchiostoma floridae; strain=S238N-H82; AL=Scaffold; RT=Major
Sequence
FTHQAALDEYDRYTLLWKFDSETITFEAQVQTTGYIGLGFSPNGGMTGSDVIIGWVKDGQ
AYLTDRYAEGYFQPRLDASQDVELLSGYENGTHTVLRFRRRLRPCDTTDDREITEDTLRI
IWSFNDVDPVALDGPDGPQYHSSNRGSKSVILLQKSPPNLDLQDGNVITFDMTNPNVKVP
SRDTTYWCTSFQLPVLDKKHHLVKVEPLVQPGNEGVVHHILIYQCSPGSNPPSGNQECSN
MPWGNCRAIMAAWAVGGTGYTYPDHVGFSMGTVDDASYVVMQTHYDNPQRLNDVYDNSGL
RFYYTPDVRQYDAGILEVGIQVNQDHAIPPQADTYDSAAYCYKECLDPQLGEPIHVFASM
LHAHQVGVGVRTKLVRNGVMETYIGRDDNYDFNLQETRFLYPEVTIKEGDELITECSYRT
TAQNIFTFGGEASSEEMCQNYLQYYPRFKLEHCDSLPYILHGVEFFGITQLDK
Download sequence
Identical sequences C3YPN8
XP_002601810.1.56174 7739.JGI215350

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]