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  Home > Genomes > NCBI 2017_08 genome > XP_002635580.1.8413

Domain assignment for XP_002635580.1.8413 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

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Strong hits

Sequence:  XP_002635580.1.8413
Domain Number 1 Region: 1370-1426
Classification Level Classification E-value
Superfamily BPTI-like 6.1e-18
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0033
Further Details:      
 
Domain Number 2 Region: 1844-1902
Classification Level Classification E-value
Superfamily BPTI-like 9.08e-18
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0035
Further Details:      
 
Domain Number 3 Region: 1721-1781
Classification Level Classification E-value
Superfamily BPTI-like 1.08e-17
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0036
Further Details:      
 
Domain Number 4 Region: 1264-1320
Classification Level Classification E-value
Superfamily BPTI-like 3.12e-17
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0031
Further Details:      
 
Domain Number 5 Region: 1617-1670
Classification Level Classification E-value
Superfamily BPTI-like 1.42e-16
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0051
Further Details:      
 
Domain Number 6 Region: 1905-1961
Classification Level Classification E-value
Superfamily BPTI-like 1.84e-16
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0049
Further Details:      
 
Domain Number 7 Region: 1500-1555
Classification Level Classification E-value
Superfamily BPTI-like 3.69e-16
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0032
Further Details:      
 
Domain Number 8 Region: 1784-1838
Classification Level Classification E-value
Superfamily BPTI-like 8.23e-16
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0045
Further Details:      
 
Domain Number 9 Region: 1145-1205
Classification Level Classification E-value
Superfamily BPTI-like 0.00000000000000106
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0039
Further Details:      
 
Domain Number 10 Region: 1443-1499
Classification Level Classification E-value
Superfamily BPTI-like 0.00000000000000866
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0026
Further Details:      
 
Domain Number 11 Region: 1087-1143
Classification Level Classification E-value
Superfamily BPTI-like 0.0000000000000213
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0018
Further Details:      
 
Domain Number 12 Region: 1989-2051
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000715
Family I set domains 0.027
Further Details:      
 
Domain Number 13 Region: 343-400
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000628
Family TSP-1 type 1 repeat 0.0038
Further Details:      
 
Domain Number 14 Region: 640-700
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000105
Family TSP-1 type 1 repeat 0.0025
Further Details:      
 
Domain Number 15 Region: 578-640
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000209
Family TSP-1 type 1 repeat 0.0041
Further Details:      
 
Domain Number 16 Region: 460-523
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000116
Family TSP-1 type 1 repeat 0.0053
Further Details:      
 
Domain Number 17 Region: 399-461
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000017
Family TSP-1 type 1 repeat 0.0046
Further Details:      
 
Domain Number 18 Region: 76-121
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000144
Family TSP-1 type 1 repeat 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_002635580.1.8413
Sequence length 2157
Comment C. briggsae CBR-PPN-1 protein [Caenorhabditis briggsae]; AA=GCF_000004555.1; RF=representative genome; TAX=6238; STAX=6238; NAME=Caenorhabditis briggsae; strain=AF16; AL=Chromosome; RT=Major
Sequence 
MRLLLISAALLLCSVPTWAFSLSSFFGSNNNAQKPYLHPNSPPEREPTRMKRQAYQVYVD
GDSSVTVDKSGQKETGNWGPWQPENECSRSCGGGVQLEKRQCSGDCTGPSARYISCNLDA
CESGSDFRAEQCAKFNDEALDGNYHKWSPYKGKNKCELVCKPESGNFYYKWADKVVDGTK
CDSKSNDICVDGECLPVGCDGKLGSSLKYDKCGKCDGDGSTCKTIEGRFDERNLSPGYHD
IIKLPEGATNIKISEARKSTNNLALKNGSDHFYLNGNGLIQVEKEVEVGGTIFVYDDAEP
ETLSAQGPLSEELTVALLFRKGSRDTAIKYEFSIPLEEEVDYMYKFDSWTPCSVTCGKGV
QTRNLYCIDGKSKGRVEDGLCEENNATKPEFEKSCETVDCAAEWFTGDWESCSSTCGDQG
QQYRVVYCHQVYANGRRVTVDDGNCTVERPAVKQTCNRFACPEWQAGPWSACSEKCGDAF
QYRSVTCRSEKEGEEGKLLAADACPSDEKEKFDTERTCNLGPCEGLTFVTGDWNLCTRCN
DTEETRDVTCKDSQGRAYPLEKCLVDNSTELPTDTRSCATQPPCVYEWTVSEWSKCTTTC
GHGHKTRRVICAIHQNGGLEVVDEGHCQAEKPEAKTNCTNEEKCTGTWYSSSWSECTAEC
GGGSQERVAVCLNYDKKPVPEWCDEAVKPSEKQDCNVDACPTCEDSEFGCCPDNTTFATG
EFNFGCSNCSETEFGCCADNVTVATGPNSKGCEEFVESPLNLEADVAAADAVEASGDAPD
ALCSVTNENGEAADVECATIAPITALLEDVFGNETDAASNETLHCSKSEFGCCPDWFTAA
TGKNNEGCPSFILGGCNETQFGCCHDEVTLARGPNLEGCGEPSCAASLYGCCKDRKTIAF
GPHYSGCERSSFPCELSDFGCCPDGETAALGKNGTGCGENCLTTKFGCCPDGKTTAKGSH
NEGCGCEFAQYGCCPDGKSVAKGAGFYGCPESCAQSQFGCCPDGKTRARGENKEGCPCQY
TRYGCCPDGETTALGPRNDGCDNCRYAKHGCCEDGETKALGPDRAGCPATTTPPFLMGGT
VAPHKIVACNQSQESGTVCGSGYKLAWHYDTTEGRCNQFWYGGCGGNDNNFATQEMCETI
CVEPPSKGRCYLPRVDGPLRCDQLQPRYYYDHTKKHCVAFWWRGCLGNANNFNSFEECSM
FCKDVGPYDEPTTAAPPAPQNIQQQYVPTPQPQEIDIVSDDQSQQQPQPQQPQQPAAPQQ
PRQSMEDICRSRQDAGPCETYSDQWFYNAFSQQCETFTYGGCGGNLNRFRTKDECERRCF
FVHGGQPSSEQAQPAQAAAPAAPAAAATNIVSPPQQPQSSPVVIPSNNKQREACHLNVDQ
GRCKGAFDSWYYEVATGSCVSFKYTGCGGNANRFPSKDQCEQLCLKPVETDIIPSISDGP
AGSNSVCDEAKDTGPCTNFATKWYYNQADGTCNRFHYGGCQGTNNRFDNEQQCKAACQNH
KDACSLPKVQGPCSGKHSYYYFNSANQQCETFVYGGCLGNTNRFATIEECNARCSQRSTT
TTTELPSLLLLQEDPQPHPAFSLKHSFAHSRRRDAPYARSVSARHHSAGSSQIEHIDCYA
VPDVGSCADYQLVWHYSATSNSCRQFYYGGCAGNTNRFADKEKCETSCVSKIEERVESVS
EASKALEDVSFTDTRHDGHFGYHDANRDPEEEEAEYVVVDTGALPELCMLPEQRGSCYDH
ILRWRYDSERSQCVSFMYSGCSPNANHFTSEETCERACGKWRNSAVCEMPAEHGDCQLAI
PKWYHDSTTKQCKMMMWTGCGGNGNSFSSKADCESLCRIESSWTNTTDFCTLERNAGPCT
DSISMWYFDHSEQDCKPFTYGGCRGNQNRFVSKEQCLQSCRDKSSEDTCTLRPEPGPCRL
GLEKYFYDPVTQSCHMFHYGGCEGNANRFDSELDCFRQCSSVKAEAGVERMAQLTSATTP
VIYIVDKNPLYVGMTFRIRCNGHGVTPITWYKNGGLLQFGTRITEENDDTLEIVDSLTSD
AGIYTCIAGQESQMSDGVEVVIKRAIGGRTTIRPMLTPAPNFVMGTPPTPRPSTSARPHS
TVATVSNALIRRTTTKACVDVGNTSTCDLIVKNGLCEKKRYGTFCCHTCTKIHSFKF
Download sequence
Identical sequences A8XY36
XP_002635580.1.8413 6238.CBG20566 CBG20566

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.