SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_002846065.1.42340 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_002846065.1.42340
Domain Number 1 Region: 99-454
Classification Level Classification E-value
Superfamily Cysteine proteinases 1.14e-75
Family Calpain large subunit, catalytic domain (domain II) 0.00057
Further Details:      
 
Domain Number 2 Region: 598-721
Classification Level Classification E-value
Superfamily Calpain large subunit, middle domain (domain III) 3.66e-20
Family Calpain large subunit, middle domain (domain III) 0.0088
Further Details:      
 
Domain Number 3 Region: 451-591
Classification Level Classification E-value
Superfamily Calpain large subunit, middle domain (domain III) 0.0000000000000667
Family Calpain large subunit, middle domain (domain III) 0.019
Further Details:      
 
Weak hits

Sequence:  XP_002846065.1.42340
Domain Number - Region: 24-73
Classification Level Classification E-value
Superfamily MIT domain 0.00222
Family MIT domain 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_002846065.1.42340
Sequence length 864
Comment calpain-7 [Arthroderma otae CBS 113480]; AA=GCF_000151145.1; RF=representative genome; TAX=554155; STAX=63405; NAME=Arthroderma otae CBS 113480; strain=CBS 113480; AL=Scaffold; RT=Major
Sequence
MSQLRDIKSQALEAEKDVRLASTQKQALEAAINVAEHYMNALRLADDPVERRLFDSKCKE
YLTLAERIKQSKDGDRLPALVPSVIPSSQPDLVDREPTSTRTQSNREQIILLENSKLNGF
VFPPWSATAVPDPGEFQADEEGGLFLDLSDLQICPVQREIFDGWKRPSEILGHHTTGAPI
LLGPNPMDLVQDVTTDCSVVASLCTGASPGKEGVPQLVRSVKMYPSEDGKVPCISPSGKY
IFRLYFNGCYRKVVIDDMLPSSKTLRSLHVIDRNNPTAIWPALVEKAYLKVRGGYDFPGS
NSGTDLWVLTGWIPEQVFLHHDELAPDHLWQRLAKFFKSGDILLTLGTGKLTEYEENELG
LISLHDYAVLNLQERDGVRQLLIKNPWAAGPVWKGVGQLRASHSLSDTSEPEPSHPSTTA
PGTFWMAFDDVLQNFDNLYLNWNPTLFRYRQDIHFRWDLSSVSIVAGCFAENPQFAVSTK
AGGTVWLLLGKHFKTGDYKKNANQLLEVAPDIEQAGFISLYVFDKNGSRVYLADGALRRG
PYVDSPNTVMMLEMPPNTTYTVVVSEQSLRRSLYSFSISAFAMSPITVNPAKEIYSHVKK
LSGAWTTSTAGGNAESERYPENPQFQLQILEKCDVNILLEAEDPGFAVHVSLIWSNGGRV
ACVRSRDIVVGSGDYRRGFALAEQRGVEKGLYTVVCSTFTPDQRGKFTLCISTTSPCFVK
PLPAEGAGNLVMKSGTGIFPPGTDRILAPITIPRLARLKLICRRRGSSIGGRNAAPSPIL
MTLELGQGPYKEILAGSGDGNFSDDVRGARIEVVDLQPEFERRGGIWLVVERIGGPSGQV
EDCIEVEILSEERIGIGSWGIGDG
Download sequence
Identical sequences C5FTB2
MCYG_05934T0 XP_002846065.1.42340

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]