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Domain assignment for XP_002929103.1.58354 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002929103.1.58354
Domain Number 1 Region: 1513-1616
Classification Level Classification E-value
Superfamily Bromodomain 1.83e-33
Family Bromodomain 0.00000089
Further Details:      
 
Domain Number 2 Region: 1360-1491
Classification Level Classification E-value
Superfamily Bromodomain 9.29e-32
Family Bromodomain 0.000000144
Further Details:      
 
Domain Number 3 Region: 30-86
Classification Level Classification E-value
Superfamily TAF(II)230 TBP-binding fragment 3.66e-18
Family TAF(II)230 TBP-binding fragment 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_002929103.1.58354
Sequence length 1870
Comment PREDICTED: transcription initiation factor TFIID subunit 1 isoform X3 [Ailuropoda melanoleuca]; AA=GCF_000004335.2; RF=representative genome; TAX=9646; STAX=9646; NAME=Ailuropoda melanoleuca; AL=Scaffold; RT=Minor
Sequence
MGPGWDLLLPEAAGGTTAAIMSDTDSDEDSAGGGPFSLTGFLFGNINGAGQLEGESVLDD
ECKKHLAGLGALGLGSLITELTANEELTGTDGALVNDEGWIRSTEDAVDYSDINEVAEDE
SRRYQQTMGSLQPLCHSDYDGDDYDADCEDIDCKLMPPPPPPPGPMKKDKDQDPLTGEKV
DFSSSSDSESEMGPQEATQAESEDGKLTLPLAGIMQHDATKLLPSVTELFPEFRPGKVLR
FLRLFGPGKNVPSVWRSARRKRKKKHRELIQEEQIQEVECLVESEVSQKSLWNYDYAPPP
PPEQCLSDDEITMMAPVESKFSQSPGDTDKVTDTKPRVAEWRYGPARLWYDMLGVPEDGS
GFDYGFKLRKMDHEPVMKCRVMEDFRKLEENSMDLLADENFLMVTQLHWEDDIIWDGEDV
KHKGTKPQRASLAGWLPSSMTRNAMAYNVQQGFAATLDDDKPWYSIFPIDNEELVYGRWE
DNIIWDAQAMPRLLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKESKKESSLKKSRIL
LGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYYPKQQGLRGTFGGNIIQHSIPAVELRQP
FFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLLKHIKKKAKMREQERQASGGGE
MFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGE
TVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFV
VGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESS
IRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDA
GYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGE
GFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLS
RWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTE
VLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLAAGSAAS
GNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTK
DEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLK
LKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGT
KIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDP
MVTLSSILESIINDMRELPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPS
REEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDD
DDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHK
YQSRESFLDDVNLILTNSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTA
KEAALEEAELESLDPMTPGPYTPQPPDLYDTNTSLSVSRDASVFQDESNMSVLDIPTATP
EKQVTQEGEDADGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDEEGDNPFSAI
QLSESGSDSDVGSGGIRPKQPRMLQENTRMGMENEESMMSYEADGGEASHGLEDSNISYG
SYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEQRSGPSVLSQVHLSEDEEDSEDFHSI
AGDSDLDSDE
Download sequence
Identical sequences XP_002929103.1.58354

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