SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_003037635.1.72525 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_003037635.1.72525
Domain Number 1 Region: 566-785
Classification Level Classification E-value
Superfamily ADP-ribosylation 6.62e-50
Family Poly(ADP-ribose) polymerase, C-terminal domain 0.00000729
Further Details:      
 
Domain Number 2 Region: 415-560
Classification Level Classification E-value
Superfamily Domain of poly(ADP-ribose) polymerase 9.42e-34
Family Domain of poly(ADP-ribose) polymerase 0.00019
Further Details:      
 
Domain Number 3 Region: 262-384
Classification Level Classification E-value
Superfamily WGR domain-like 3.66e-30
Family WGR domain 0.00091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_003037635.1.72525
Sequence length 787
Comment PARP-1-like protein [Schizophyllum commune H4-8]; AA=GCF_000143185.1; RF=representative genome; TAX=578458; STAX=5334; NAME=Schizophyllum commune H4-8; strain=H4-8; AL=Scaffold; RT=Major
Sequence
MPPRKKADFDAAPAVPTRQSSRIKAAAAAAPPPAPAPPVKKAPAKKAAAKKKEVEEEEEE
GEEEEETKPKARSRAGSRAGSKPPSTTKAKAPARKPASKAAAKKTVEDVQEEDEEEEEPQ
PKSRSRAGSRAGSKPPSTTKPRATSKKPATKAAAKKTVDDIAEADEEDEDELEADADQET
DAQPTGKRRSPKGYRARAKPNSDAKAKPKSDTKPKSTGKRARAVTPSDDEDEQQAKTASK
KAKKAAAVDDDAMDEDDEPPAKMVSVLKRGAAPVDPESGKVSTHQVYANAEGVWDAMLNQ
TDIGANKNKFYVIQLLHPIDNESSCWLYTRWGRVGERGQSQLKGPWPPATAVSEFKKQFK
AKAAVPWEQRVGMVAKKGKYFWLERDFGDEDKAEEPSKKGKGRKSEREATPIPDSSLDAE
VQDLCRLIFNTALIDAHLSSMNYDANKLPLGKLSKNTILQGFSALKQLADVIKDPNGEVA
KANGGQRAAIEHFSGVYYSIIPHAFGRNRPTPIGDERVLKAELDLVDALGDMEVASKLIS
SSTPRDESGAPMNPLDAKFRSLELTRMEPIARASAEFAALEAYVNNTHGATHHFRVGVRH
IYRVERESETVAWKKAGFDRLGEGERMLLWHGSRTTNFAGILKQGLRIAPPEAPVTGYMF
GKGVYFADMMSKSAGYCYMGLSGQTGLLLLCEVAVKPFYERYDAEYDADKGCKKANALAT
KGIGRTQPVNWKDAGEVLGNDALKGCHMPDGPCDNNADPKAYLQYNEYIVYNTAQIRARY
LLMVDQK
Download sequence
Identical sequences D8PLA0
jgi|Schco1|231882|fgenesh2_pg.1_#_1605 XP_003037635.1.72525

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]