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Domain assignment for XP_003261973.1.23891 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003261973.1.23891
Domain Number 1 Region: 41-132
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.44e-38
Family SCAN domain 0.0000856
Further Details:      
 
Domain Number 2 Region: 335-392
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.66e-25
Family Classic zinc finger, C2H2 0.0029
Further Details:      
 
Domain Number 3 Region: 391-448
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.45e-23
Family Classic zinc finger, C2H2 0.0032
Further Details:      
 
Domain Number 4 Region: 279-336
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.08e-21
Family Classic zinc finger, C2H2 0.0044
Further Details:      
 
Domain Number 5 Region: 437-489
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.85e-21
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_003261973.1.23891
Sequence length 492
Comment PREDICTED: zinc finger and SCAN domain-containing protein 30 isoform X1 [Nomascus leucogenys]; AA=GCF_000146795.2; RF=representative genome; TAX=61853; STAX=61853; NAME=Nomascus leucogenys; AL=Chromosome; RT=Major
Sequence
MSGEATVLAYHAPEEQEGLLVVKVEEENYVLGQDFGLQGNPWSQEVFRQKFRQFSYSDST
GPREALSRLRELCCQWLRPEVHSKEQILELLMLEQFLAILPEELQTWLREHRPENGEEAV
TMLEELEKELEEPRQQDTTHGQEMFWQEMTSTGALKSLNSPVQPLENQCKTETQESQAFQ
ERDGKMVAGKVLMAKQEIVECVASAAMISPGKLPGETPSKQIAEEALGGLDNSKKQKGNA
AGNKISQLPSQDRHFSLVTFNRRIPTEHSVLESHESEASFSMNSNDITQQRVHTGEKLYE
CFDCGKTFCQSSKLIRHQRIHTGERPYACKECGKAFSLSSDLVRHQRIHSGEKPYECCEC
GKAFRGSSELIRHRRIHTGEKPYECGECGKAFSRSSALIQHKKIHTGDKGYECIACGKAF
GRSSILIEHQRIHTGEKPYECNECGKSFNQSSALTQHQRIHTGEKPYECSECRKTFRHRS
GLMQHQRTHTRV
Download sequence
Identical sequences A0A2I3HVL0
ENSNLEP00000007626 ENSNLEP00000007626 XP_003261973.1.23891

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