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Domain assignment for XP_003264336.1.23891 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003264336.1.23891
Domain Number 1 Region: 378-495
Classification Level Classification E-value
Superfamily Cadherin-like 2.43e-26
Family Cadherin 0.0018
Further Details:      
 
Domain Number 2 Region: 158-266
Classification Level Classification E-value
Superfamily Cadherin-like 4.28e-26
Family Cadherin 0.00022
Further Details:      
 
Domain Number 3 Region: 267-383
Classification Level Classification E-value
Superfamily Cadherin-like 2.71e-22
Family Cadherin 0.0012
Further Details:      
 
Domain Number 4 Region: 488-595
Classification Level Classification E-value
Superfamily Cadherin-like 3.43e-19
Family Cadherin 0.0012
Further Details:      
 
Domain Number 5 Region: 79-165
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000000771
Family Cadherin 0.0042
Further Details:      
 
Weak hits

Sequence:  XP_003264336.1.23891
Domain Number - Region: 584-648
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 0.00861
Family Rhodopsin-like 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_003264336.1.23891
Sequence length 801
Comment PREDICTED: cadherin-20 [Nomascus leucogenys]; AA=GCF_000146795.2; RF=representative genome; TAX=61853; STAX=61853; NAME=Nomascus leucogenys; AL=Chromosome; RT=Major
Sequence
MWTSGRMSNAKNWLGLGMSLYFWGLMDLTTTVLSDTPTPQGELEALLSDKPQSHQRTKRS
WVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQ
RLDREERAQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVATVPEMSPV
GTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSKTGVIRTALMNMDREAKEYYEV
IIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMSVLESAPISSTVGRVFAKD
LDEGINAEMKYTIVDGDGADAFDISTDPNFQVGIITVKKPLSFESKKSYTLKVEGANPHL
EMRFLNLGPFQDTTTVHISVEDVDEPPVFEPGFYSVEVPEDVAIGTTIQIISAKDPDVTN
NSIRYSIDRSSDPGRFFYVDITTGALMTARPLDREEFSWHNITVLAMEMNNPSQVGSVPV
TIKVLDVNDNAPEFPRFYEAFVCENAKAGQLIQTVSAVDQDDPRNGQHFYYSLAPEAANN
PNFTIRDNQDNTARILTRRSGFRQQEQSVFHLPILIADSGQPVLSSTGTLTIQVCSCDDD
GHVMSCSPEAYMLPVSLSRGALIAILACIFVLLVLVLLILSMRRHRKQPYIIDDEENIHE
NIVRYDDEGGGEEDTEAFDIAAMWNPREAQAGAAPKTRQDMLPEIESLSRYVPQTCAVNS
TVHSYVLAKLYEADMDLWAPPFDSLQTYMFEGDGSVAGSLSSLQSATSDSEQNFDFLTDW
GPRFRKLAELYGASEGPAPLW
Download sequence
Identical sequences G1RAV5
XP_003264336.1.23891 XP_003264337.1.23891 ENSNLEP00000010352 ENSNLEP00000010352

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