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Domain assignment for XP_003276650.1.23891 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003276650.1.23891
Domain Number 1 Region: 288-472
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.35e-51
Family SPRY domain 0.0000899
Further Details:      
 
Domain Number 2 Region: 7-79
Classification Level Classification E-value
Superfamily RING/U-box 5.96e-19
Family RING finger domain, C3HC4 0.0072
Further Details:      
 
Domain Number 3 Region: 82-144
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.00000000000000102
Family B-box zinc-binding domain 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_003276650.1.23891
Sequence length 487
Comment PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform X1 [Nomascus leucogenys]; AA=GCF_000146795.2; RF=representative genome; TAX=61853; STAX=61853; NAME=Nomascus leucogenys; AL=Chromosome; RT=Major
Sequence
MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV
DGSSSPPNVSLARVIEALRLPGDPEPKVCMHHRNPLSLFCEKDQELICGLCGLLGSHQHH
PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ
ELHHLVDEEKARCLEGIGCHTRGLVASLDMQLEQAQGTRERLVRAECVLEQFGNEDHHEF
IRKFHSMASRAELPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFQKVLPAPEPLKLDP
ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD
WRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHY
EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGRLS
LEQPTKL
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Identical sequences G1RCN0
ENSNLEP00000010979 ENSNLEP00000010979 XP_003276649.1.23891 XP_003276650.1.23891

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