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Domain assignment for XP_003374744.1.5133 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003374744.1.5133
Domain Number 1 Region: 1022-1335
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.23e-69
Family Tandem AAA-ATPase domain 0.0000615
Further Details:      
 
Domain Number 2 Region: 757-1020
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.6e-60
Family Tandem AAA-ATPase domain 0.000041
Further Details:      
 
Domain Number 3 Region: 1495-1615
Classification Level Classification E-value
Superfamily Bromodomain 6.67e-29
Family Bromodomain 0.001
Further Details:      
 
Domain Number 4 Region: 661-717
Classification Level Classification E-value
Superfamily BRK domain-like 0.000000000000196
Family BRK domain-like 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_003374744.1.5133
Sequence length 1787
Comment domain protein, SNF2 family [Trichinella spiralis]; AA=GCF_000181795.1; RF=representative genome; TAX=6334; STAX=6334; NAME=Trichinella spiralis; strain=ISS 195; AL=Scaffold; RT=Major
Sequence
MEGISVHKSYQQEGAGMMRQMEPPDGSMSIPQGEYGMCYPPQGQSNMMLPSGRPVQMQNF
YSQDPNVRKSVYNIIWLALGALMKCANLMEFKTKTTVGYVSNLNSRTHLFPQQQSYVTSI
PPGPANSNQAYANQPAYPYQQYQQGYPAQTPPSAPAAGYGYSSNMPMNVASPMPTQGYPQ
TPSQPFQGQPPLPEASTVAHLERTIAELEQKGMTNDPRYHQLVIVLNKLKGARSFRQPVA
ETVHADTCKKYEQQQHLSEPGPYVYSDSPVPSPSVCSQNQQQQRRDQQTLPAPEDGSSGT
FTAGQLTQIRHQIAIYRLLARNLPIKESLLEAALKSSSEQPEKPKPISLLPEPYSMPGPS
IDGVGQLPYNLNALNTILQQKQRNIVFGSMNKPVGLDPVELMRERENRLQNRIGLRIAEL
ERIQAGPDGMRPDLLVKATIELRSLRLLNVQRSLRRDISNIMKHSSTLETSLNPRAYHRT
KKQSLREARVTEKLEKQQKMEQERKKRQRHQEFLNALLVHAKEFREYHRNNQIKLGKLKK
AVLTYHMNTEREKKKEEERRERERMQKLMQEDEEGYRKLLDQKKDRRLVYLLHQTDEYVA
NLTGLVKQHQMNEKQRRKLEKKEMREQRRREKEEKRVVEEQLKKLNSAFGHDESSTKEEN
GSDQTIRVREVATGAILTGDDAPKASELDAWLEAHPGYEVVSRDEHGKDSSSSESDSDES
DSETDVALVSSSSSKVELSQMDEDDRNKAIIQAAQTEDDEYTPATNVEEQSYYNTAHRIH
EKVLEQPSILVGGKLKEYQKKGVEWLVSLYVNNLNGILADEMGLGKTIQTIALISHLIEK
KRVNGPYLIIVPLSTLSNWILEFEKWAPSVVKIVYKGSPNVRRALSFQTRQEKFNCLLTT
YEYIIKDKAILSKIRWKYMIIDEGHRMKNHHCKLTQVLNTYYTSPHRLLLTGTPLQNKLP
ELWALLNFLLPSIFKCCNTFEQWFNAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLRR
LKKEVESQLPEKVEYVIKCDMSALQKVLYQHMQAKGVMVTRETDKTKKGTPAAGVRTLMN
TVMQLRKLCNHPYMFEHIEEAMAEHFGYPDKIVSGPELYRASGKFELLDRVLPKLKASGH
RVLLFCQMTCLMTIMEDYFHYRDFKYLRLDGTTKSEDRGELLAKFNAPASDYFIFLLSTR
AGGLGLNLQAADTVIIFDSDWNPHQDIQAQDRAHRIGQLREVRVLRLMTVNSVEERILAA
ARYKLNVDEKVIQAGLFDQKSTASERRQFLQAILQNEIDNDEDANEVPDDETVNQMIARS
EEEFEFFQRMDSERRRTEARELQAATPSTSPTSKPKARLIEEHELPAWLLKNEEEIERLT
NEDVQDRLFGKGARRKKEVDYSQDSWSERQWMKAIDEELDDDFDDFDDDEELKRKKFKRR
GPGRGRPVDDHHHSGAGHERAPRGRGRKQQHHHQPPPTHAEGDDDEDFTMITTPKRRRGA
PPKPRPSKQLLNLMNQIVEDTVQYRTNEGRQLSEHFMQLPSRRELPDYYELIAIPVDFKK
IRKKLTDGRYKNLEELDKDVQLLCDNAQTYNLEGSEIYEDSVALRNLWNNLREQAVTRDN
AETEAATGDAAIATSSWSSQNEKKKSLQPKKKAMHGLFVEDEDEDDANVSLASAVTAANG
DENNSSNISNNNNNENSNSGNDNNNATAETAAAFVFCQYLPLQLVLNYFSSTFCFFPIYK
NKKAFGKVELCNLEDVVIAIISSRLVQADEMKCKFSTLMKKINSPRL
Download sequence
Identical sequences E5SHL4
XP_003374744.1.5133 EFV55707

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