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Domain assignment for XP_003421182.1.64505 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003421182.1.64505
Domain Number 1 Region: 49-137
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.1e-36
Family SCAN domain 0.0000932
Further Details:      
 
Domain Number 2 Region: 357-414
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.98e-26
Family Classic zinc finger, C2H2 0.0031
Further Details:      
 
Domain Number 3 Region: 403-455
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.42e-20
Family Classic zinc finger, C2H2 0.0034
Further Details:      
 
Domain Number 4 Region: 489-539
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.2e-18
Family Classic zinc finger, C2H2 0.0054
Further Details:      
 
Domain Number 5 Region: 319-371
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.69e-18
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 6 Region: 217-263
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.000000235
Family KRAB domain (Kruppel-associated box) 0.0057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_003421182.1.64505
Sequence length 547
Comment PREDICTED: zinc finger protein with KRAB and SCAN domains 4-like [Loxodonta africana]; AA=GCF_000001905.1; RF=representative genome; TAX=9785; STAX=9785; NAME=Loxodonta africana; AL=Scaffold; RT=Major
Sequence
MARESRQRAALDAQSTEDQTRLLTVKVEKEEASALAEETCLPGSPAPGRERSRQRFRGFR
YPEAAGPREVLGRLRELCWQWLQPEMHSKEQILELLVLEQFLTILPGALQSWVQEQHPES
GEEVVVLLEYLERQLDEPRQQVPGGDRGQELLYCKMALLTGAQGSQSSQFQPMKALLKHE
SLRSQPLQERVLWVPGLAQGGSCKEDTVVAARLIPESQGLLKVEDVDLTLSPGWPKLDSS
QANLYRDERQENCGSLISLGGEIQTKISNLPPEDENLVREPRELPCHLGEDIAKIPPCAE
AGEQEARVHRKQKNATGSRRHYCHECGKSFAQSSGLSKHRRIHTGEKPYECEECGKAFIG
SSALVIHQRVHTGEKPYECEECGKAFSHSSDLIKHQRTHTGEKPYECDDCGKTFSQSCSL
LEHHRIHTGEKPYRCDMCGKAFRRSSHLLRHQRIHGGDKNMQDSELGDTWESQGRMENQW
ENAEAPISYKCNECDRSFTRNRSLIEHQKIHTGEKPYQCNACGKGFTRTSYLVQHQRSHV
GKRILSQ
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Identical sequences XP_003421182.1.64505

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