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Domain assignment for XP_003464442.1.53824 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003464442.1.53824
Domain Number 1 Region: 1191-1489
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 4.97e-67
Family Tandem AAA-ATPase domain 0.000047
Further Details:      
 
Domain Number 2 Region: 916-1189
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.44e-60
Family Tandem AAA-ATPase domain 0.0000495
Further Details:      
 
Domain Number 3 Region: 2628-2710
Classification Level Classification E-value
Superfamily BRK domain-like 5.1e-27
Family BRK domain-like 0.0000043
Further Details:      
 
Domain Number 4 Region: 2558-2633
Classification Level Classification E-value
Superfamily BRK domain-like 6.93e-16
Family BRK domain-like 0.000061
Further Details:      
 
Domain Number 5 Region: 783-863
Classification Level Classification E-value
Superfamily Chromo domain-like 0.00000000000118
Family Chromo domain 0.024
Further Details:      
 
Domain Number 6 Region: 874-935
Classification Level Classification E-value
Superfamily Chromo domain-like 0.00000000000176
Family Chromo domain 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_003464442.1.53824
Sequence length 2996
Comment PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform X1 [Cavia porcellus]; AA=GCF_000151735.1; RF=representative genome; TAX=10141; STAX=10141; NAME=Cavia porcellus; strain=inbred line 2N; AL=Scaffold; RT=Major
Sequence
MADPGMMSLFGEDGNIFSEGLEDLGECGYPETPVNPMGQQMPMDQGFASLQPPLHHPSTN
QNQTKLTHFDHYNQYEQQKMHLMDQPSRMMGSAPGNGLASPHSQYHTPPVPQVPHGGSGG
AQMGVYPGMQNERHGQSFVDSGSMWGPRAVQVPDQIRAPYQQQQPQPQPPQPAPSGPPAQ
GHPQHMQQMGSYMARGDFSMQQHGQPQQRMSQFPQGQEGLNQGNPFIATSGPGHLSHVPQ
QSPSMAPSLRHSVQQFHHHPPTALHGESVAHNPRFSPNPPQQGAVRPQTLNFSSRSQTVP
SPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSNSGQG
LMHQQPIHASGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGI
PMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMPQSRPFLGMSSAPRELTGHMRPNGC
PGVGLGDPQAIQERLMPGQQHAGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQL
HPSPQNTPQKVPVHQHSPSEPFLEKPVPDMTQVSGPNAQLVKSDDYLPSIEQQPQQKKKK
KKNNHIAAEDPSKNFGKDDFSGGVDNQELNRNSLDGSQEEKKKKKRPKVKKDPKEPKEPK
EKKEPKEPKTPKAPKIPKEPKEKKAKTTTPKPKSSKKSSNKKSDSEGSALKKKVNKGKTE
GSENSDLDKTPPPSPPPEEDEDPGIQKRRSSRQVKRKRYTEDLEFRISDEEADDADAAGR
DSPSNTSQSEQQESVDAEGPVVEKIMSSRSVKKQKESGEEVEVEEFYVKYKNFSYLHCQW
ASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEIDRIMDFARSTDDRGEP
VTHYLVKWCSLPYEDSTWELRQDIDQAKIDEFEKLMSREPETERVERPPADDWKKSESSR
EYRNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFL
VIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAI
ITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNT
VEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP
KEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLING
AEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLD
ILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADT
CIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQ
SMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITI
ESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRK
QTRLYSAVKEDELMEFSDLESDSEEKPCAKPRRPQDKSQGYARSECFRVEKNLLVYGWGR
WTDILSHGRYKRQLTEHDVETICRTILVYCLNHYRGDENIKSFIWDLITPTADGQTRALV
NHSGLSAPVPRGRKGKKVKAQSTQPLMQDADWLASCNPDALFQEDSYKKHLKHHCNKVLL
RVRMLYYLRQEVIGDQAGKILEGADSSEVDVWIPEPFHAEVPTDWWDKEADKSLLIGVFK
HGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPT
RTPFKDEIDEFANSPEDKEESMEVHATGKHGESSAELGQLYWPNTSSLTTRLRRLITAYQ
RSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTF
GVIFDPMKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPDDEPPDLAS
LIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGRHDRDLL
VGAAKHGVSRTDYHILNDPELSFLDAHKNFAQNRGAGSVSSLNPLAVGFGQTPPVIASAH
SHDERVTEQAEGKTEESENSTAKEKSERKEEEEEANSRGKDSKLECETEASSVKNELKAV
EGSAEPGSKSVSEKGSEVDEEEKLEDDDKSEESSQPEAGTVSRGKNFDEESNASMSTARD
ETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNVCEAVLKGKWPVNRRQMFD
FQGLIPGYTPAAMDSPLQKRSFTELSMVGQAGVGGSEDITASPQLSKEDALNLSIPRQRR
RRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFSSL
TSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRKNVEG
LDLLFMSHKRSALSAEDAEVTKAFEEDIETPSIRNIPSPGQLDPDTRMPVINLEDGTRLV
GEDAPKNKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTL
TGEERVPVVNKRNGKKMGGAMAPPMKELPRWLEENPEFAVAPDWTDIVKQSGFVPESMFD
RLLTGPVVRGEGASRRGRRPKSEMARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNL
QNLQSLQLAGLMGFPPGLATAATAGGDTKNPAAVLPLMLPGMAGLPNVFGLGGLLNNPLS
AATGNTTTASSQDPEDGTSKVEEKVNENEDENKDSEKSTDAVSATDSANGSVGAATAPAG
LPSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSGEGKAAGKA
EGGPFKDGGENLEGSDAEESLDKTAESSVLEDEIAQGEELDSLEGGEDGENNENDE
Download sequence
Identical sequences H0VNL6
XP_003464442.1.53824

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