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Domain assignment for XP_003502057.1.69978 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003502057.1.69978
Domain Number 1 Region: 2190-2427
Classification Level Classification E-value
Superfamily Plakin repeat 4.1e-84
Family Plakin repeat 0.000000000518
Further Details:      
 
Domain Number 2 Region: 1948-2183
Classification Level Classification E-value
Superfamily Plakin repeat 4.1e-76
Family Plakin repeat 0.00000256
Further Details:      
 
Domain Number 3 Region: 2501-2541,2590-2784
Classification Level Classification E-value
Superfamily Plakin repeat 1.57e-68
Family Plakin repeat 0.00000000868
Further Details:      
 
Domain Number 4 Region: 816-944,971-998
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000000985
Family Spectrin repeat 0.0079
Further Details:      
 
Domain Number 5 Region: 306-435
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000000936
Family Spectrin repeat 0.011
Further Details:      
 
Domain Number 6 Region: 2440-2494
Classification Level Classification E-value
Superfamily Plakin repeat 0.0000000000549
Family Plakin repeat 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_003502057.1.69978
Sequence length 2851
Comment PREDICTED: desmoplakin isoform X1 [Cricetulus griseus]; AA=GCF_000223135.1; RF=representative genome; TAX=10029; STAX=10029; NAME=Cricetulus griseus; AL=Scaffold; RT=Major
Sequence
MPDFLCNADRKRDWCTHGPGVEEAVQVLTDGRSGRALQTGTMSRHQNQNTIQELLQNCAD
CLMRAELIAQPELKYGDGIQLARSRELDECFAQANDQMEITDSLIREMRQMGQPCDAYQK
RLLQLQEQMRALYKAISVPRVRRASSKGGGGYTCQSGSGWDEFTKRLTGECLGWMRQQRA
EMELIAWGVDSGAVEQHINSHRSIHNAIGDYRWQLDKIKADLREKSAIYQLEEEYENLLK
ASFERMDHLRQLQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLE
VKEKELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQ
FFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVN
KSKKIVQLKPRNPDYRSNKPIILRALCDYKQDQKIVHKGDECILKDNNERSKWYVTGPGG
VDMLVPSVGLIIPPPNPLAVDLSCKIEQYYEAILALWNQLYINMKSLVSWHYCMIDIEKI
RAMTIAKLKTMRQEDYMKTIEDLELHYQDFIKNSQGSEMFGDDDKRRMQSQFTDAQKHYQ
TLVIQLPGHPQHQTVTKTEITHVGSCQDVNHNKVIETNRENDKQETWLLMELQKIRRQME
HCEGRMTLKNLLLTDQGSTHHITVKINELKSVQNDSQAIAEVLNQLKDMLANFRGSEKYC
YLQNEIFGLFQKLENINGVTDGYLNSLCSIRALLQAILQTEDMLKVYEARLTEEETVCLD
LDKVEAYRCGLKKIKSDLNLKKSLLATMKTELQKAQQIHSQSSQQYPLYDLDLGKFNEKV
MQLTDRWQKIDKQIDFRLWDLEKQIKQLRNYRDNYQSFCKWLYDAKRRQDSLESMKFGDS
NTVMRFLNEQKNLHNEISGKRDKSEEVHKIAELCANSIKDYELQLASYTSGLETLLNIPI
KRTMVQSPSGVILQEAADIHARYIELLTRSGDYYRFLSEMLKSLEDLKLKNTKIEVLEEE
LRLARDANSENCNKNKFLDQNLQKYQAECSQFKAKLVSLEELKRQAELDGKSAKQNLDKC
YGQIKELNEKITRLTYEIEDEKRRRKTVEDRFDQQKNDYDQLQKARQCEKENLGWQKLES
EKAIKEKEYEIERLRVLLQEEGARKREYENELAKVRNHYNEEMSNLRNKYETEINITKTT
IKEISMQKEDDSKNLRNQLDRLSRENRDLKDEIVRLNDSILQATEQRRRAEENALQQKAC
GSEIMQKKQHLEIELKQVIQQRSEDNARHKQSLEEAAKTIQDKNKEIERLKAEFQDEAKR
RWEYENELSKVRNSYDEEIISLKNQFETEINITKTTIHQLTMQKEEDTSGYRAQIDNLTR
ENRSLSEEVKRLKNTLAQTTDNLRRVEENVQQQKATGSEMSQRKQQLEIELRQVTQMRTE
EGLRYKQSLDDAAKTIQDKNKEIERLKQLVEKETNERKCLEDENSKLQRAQYDLQKANNS
ATETISKLKVQEQELTRLRIDYERVSQERTVKDQDITRFQSSLKDLQLQKQKVEEELNRL
KRSASDDSSKRKMLEEELEGMRRSLKEQAIKITNLTQQLEQASIVKKRSEDDLRQQRDVL
DGHLREKQRTQEELRRLSLDVEALRRQLVQEQENVKQAHLRNEHFQKAIEDKSRSLNESK
IEIERLQSLTENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSDKNATISELRSQLQISN
NRTLELQGLINDLQRERENLRQEIEKFQKQALEASNRIQESKSQCTQVVQERESLLVKIK
VLEQDKARLQRLEDELNRAKATLEAESRVKQRLECEKQQIQNDLNQWKTQYSRKEEAIRK
IESEREKSEREKNSLRSEIERLQAEIKRVEERCRRKLEDSTRETQSQLETERCRHQREID
KLRQRPYGSHRETQTEYEWTVDSSKLVFDGLRKKVTAMQLYECQLIDKTTLDKLLKGKKS
VEEVASEIQPFLRGAGAIAGASASPKEKYSLVEAKRKKFITPESTVMLLEAQAATGGIID
PHRNEKLTVDNAIARDLIDFDDRQQIYTAEKAITGFDDPFSGKTVSVSEAIKKNLIDRET
GMRLLEAQLASGGVVDPVNSVFLPKDVALARGLIDRDLYRSLNDPRDSQKNFVDPITKKK
VSYMQLRERCRIEPHTGLLLLSVQKRSMSFQGIRQPVTVTELVDSGILRPSTVNELESGQ
ISYDEVGERIKDFLQGSSCIAGIYNETTKQKLGIYEAMKIGLVRPGTALELLEAQAATGF
IVDPVSNLRLPVEEAYKRGLVGIEFKEKLLSAERAVTGYNDPETGNIISLFQAMNKELIE
KGHGIRLLEAQIATGGIIDPKESHRLPVDMAYKRGYFNEELSEILSDPSDDTKGFFDPNT
EENLTYLQLKERCIKDEETGLCLLPLKEKKKQVQTSQKNTLRKRRVVIVDPETNKEMSVQ
EAYKKGLIDYETFKELCEQECEWEEITITGSDGSTRVVLVDRKTGSQYDIQDAIDKGLVD
RKFFDQYRSGSLSLTQFADMISLKNGVGNSSGLGGGVNDDVFSSSRHESVSKISTISSVR
NLTIRSSSLSDPLEESSPIAAIFDTENLEKISITEGIERGIVDSITGQRLLEAQACTGGI
IHPTTGQKLSLQDAVSQGLIDQDMATRLKPAQKAFIGFEGVKGKKKMSAAEAVKEKWLPY
EAGQRFLEFQYLTGGLVDPEVHGRISTEEAIRKGFIDGRAAQRLQDISSYAKILTCPKTK
LKISYKDAMNRSMVEDITGLRLLEAASVSSKGLPSPYNMSAPGSRSGSRSGSRSGSRSGS
RSGSRRGSFDATGNSSSYSYSYSFSSSSIGH
Download sequence
Identical sequences XP_003502057.1.69978

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