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Domain assignment for XP_003819382.1.60992 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003819382.1.60992
Domain Number 1 Region: 7-168
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 1.15e-59
Family Rap30/74 interaction domains 0.0000000189
Further Details:      
 
Domain Number 2 Region: 446-517
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 4.62e-23
Family C-terminal domain of the rap74 subunit of TFIIF 0.000036
Further Details:      
 
Domain Number 3 Region: 170-272
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 0.000000314
Family Rap30/74 interaction domains 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_003819382.1.60992
Sequence length 517
Comment PREDICTED: LOW QUALITY PROTEIN: general transcription factor IIF subunit 1 [Pan paniscus]; AA=GCF_000258655.2; RF=representative genome; TAX=9597; STAX=9597; NAME=Pan paniscus; AL=Chromosome; RT=Major
Sequence
MAALGPSSQNVTEYVVRVPKNTAKKYNIMAFNAADKVNFATWNQARLERDLSNKKIYQEE
EMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQPWLLRVNGKSGRKFKGIKKGGVTE
NTSYYIFTQCPDGAFEAFPVHNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQR
RLKDQDQDEDEEEKEKRGRRKASELRIHDLEDDLEISSDASDASGEEGGRVPKAKKKAPL
AKGGRKKKKKKGSDDEAFEDSDDGDFEGQEVDYMSDGSSSSQEEPESKAKAPQQEEGPKG
VDEQSDSSEESEEEKPPEEEKEEEEEKKAPXPQEKKRRKDSSEESDSSEESDIDSEASSA
LFMAKKKTPPKRERKPSGGSSRGNSRPGTPSAEGGSTSSTLRAAASKLEQGKRVSEMPAA
KRLRLDAGPQSLSGKSTPQPPSGKTTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQTK
KTGLSSEQTVNVLAQILKRLNPERKMINDKMHFSLKE
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Identical sequences XP_003819382.1.60992

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