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Domain assignment for XP_003963564.1.43653 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003963564.1.43653
Domain Number 1 Region: 38-483
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 4.19e-95
Family Integrin alpha N-terminal domain 0.000000000207
Further Details:      
 
Domain Number 2 Region: 786-1011
Classification Level Classification E-value
Superfamily Integrin domains 2.43e-55
Family Integrin domains 0.0000132
Further Details:      
 
Domain Number 3 Region: 484-645
Classification Level Classification E-value
Superfamily Integrin domains 6.28e-40
Family Integrin domains 0.0000144
Further Details:      
 
Domain Number 4 Region: 646-782
Classification Level Classification E-value
Superfamily Integrin domains 1.26e-37
Family Integrin domains 0.00001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_003963564.1.43653
Sequence length 1056
Comment PREDICTED: integrin alpha-5-like [Takifugu rubripes]; AA=GCF_000180615.1; RF=representative genome; TAX=31033; STAX=31033; NAME=Takifugu rubripes; AL=Chromosome; RT=Major
Sequence
MGPGRFGAQAPGTVAPLSRSFLCIMLLLTSSLTICEAFNLDLESPTVYSGPAGSYFGYSV
DFYLVNTPSASVVIGAPKAKTRQVNIKEGGSVFYCPWSLSQTDCHAIEFDTEGDRTTLLN
NTEVQVDFKSHQWFGATVRTHGDTILACAPLYSWRTEKDIPYVDPTGTCYLSTQNFTKFV
EYAPCRTEISDAVGQGYCQGGFSADFTKDGKVVLGGPGSYFWQGQIISAAKEDIIRTYYP
GYFMQSVDNQIQTKQVRAAHDDSYQGYSVAVGEFSGDGTEDFVAGVPKGLKLYGLVSILN
GRDLKTLINYTGEQMGSYFGYAVATTDVNGDGMTDLLVGAPMFMVRGSDSRLEEMGRVYT
YLQRGPLNLELRPSHLTGTQVFGRYGSTIAPLGDLNQDGFNDVAISCPFGGEEQQGLVYI
YNGYSEGLSEKPSQVIAGQWAAGSIPSSFGFALRGAKDLDMNGYPDLMVGAFGVNKAVLY
RSRPIVTAKASLTIYPNMINPEEKNCMITSGNTSIPVSCVNLSFCISADGKHLPDVLDFQ
VEVQLDSQKHKQKGAVKRALFLDSQQPLLQRSLAVRRGENVCKHTKLYLRDEKEFRDKLS
SIYVALNFSLDPEAPADSHGLRPILNYQIANVKEQKAQILLDCGEDNICVPDLKLAVQGN
RKEVYLGDDNALTLTFNARNEGEGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSYDT
ENQTRYLSCDLGNPMKSGTSVWAGLRFTVPRLKDTHKTVQFELQIRSKNENNSHSEVVPY
MLEVVVQADVILQGVSRPDKVFLPPANWKSTKSYGVENDVGPAVEHVYELVNNGPSGISQ
TVLELRCPLSTQGQTVLYPLEFSTQGPINCTSDSNMNHLGLKLQRPPTESPILAQKADEH
HIVKRDVHKNPLAHLTNLSCSNSDCWTLRCNVGLLERGTTAILKVRSRVWAETFVERAYK
QYVLECLAGYSVRKMPYLILPKYYPSGEEKVVTPLLWNKPDLENSVPLWIIILAILAGLL
LLALLIYVLYKIGFFKRSVPYDMAMEKAQIKPVSEA
Download sequence
Identical sequences XP_003963564.1.43653

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