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Domain assignment for XP_004049142.1.27298 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004049142.1.27298
Domain Number 1 Region: 39-484
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 6.93e-98
Family Integrin alpha N-terminal domain 0.000000000696
Further Details:      
 
Domain Number 2 Region: 785-1015
Classification Level Classification E-value
Superfamily Integrin domains 5.75e-66
Family Integrin domains 0.00000498
Further Details:      
 
Domain Number 3 Region: 485-643
Classification Level Classification E-value
Superfamily Integrin domains 3.77e-46
Family Integrin domains 0.0000131
Further Details:      
 
Domain Number 4 Region: 644-778
Classification Level Classification E-value
Superfamily Integrin domains 7.32e-37
Family Integrin domains 0.0000138
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004049142.1.27298
Sequence length 1063
Comment PREDICTED: integrin alpha-8 [Gorilla gorilla gorilla]; AA=GCF_000151905.2; RF=representative genome; TAX=9595; STAX=9593; NAME=Gorilla gorilla gorilla; AL=Chromosome; RT=Major
Sequence
MSPGASRGPRGSQAPLIAPLCCAAAALGMMLWTPACQAFNLDVEKLTVYSGPKGSYFGYA
VDFHVPDASTASVLVGAPKANTSQPDIMEGGAVYYCPWPAEGSAQCRQIPFDTTNNRKIR
VNGTKEPIEFKSNQWFGATVKAHKGKVVACAPLYHWRTLKPTPEKDPVGTCYVAIQNFSA
YAEFSPCRNSNADPEGQGYCQAGFSLDFYKNGDLIVGGPGSFYWQGQVITASVADIIANY
SFKDILRKLAGEKQTEVAPASYDDSYLGYSVAAGEFTGDSQQELVAGIPRGAQNFGYVSI
INSTDMTFIQNFTGEQMASYFGYTVVVSDVNSDGLDDVLVGAPLFMEREFESNPREVGQI
YLYLQVSSLLFRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDVAIGVPFAGKDQRGKVL
IYNGNKDGLNTKPSQVLQGVWASHAIPSGFGFTLRGDSDIDRNDYPDLIVGAFGTGKVAV
YRARPVVTVDAQLLLHPMIINLENKTCQVPDSMTSAACFSLRVCASVTGQSIANTIVLMA
EVQLDSLKQKGAIKRTLFLDNHQAHRIFPLVIKRQKSHQCQNFIVYLRDETEFRDKLSPI
NISLNYSLDESTFKEGLGVKPVLNYYRENIVSEQAHILVDCGEDNLCVPDLKLSARPDKH
QVIIGDENHLMLIINARNEGEGAYEAELFVMIPEEADYVGIERNNKGFRPLSCEYKMENV
TRMVVCDLGNPMVSGTNYSLGLRFAVPRLEKTNMSINFDLQIRSSNKDNPDSNFVSLQIN
ITAVAQVEIRGVSHPPQIVLPIHNWEPEEEPHKEEEVGPLVEHIYELHNIGPSTISDTIL
EVGWPFSARDEFLLYIFHIQTLGPLQCQTNPNINPQDIKPAASPEDTPELSAFLQNSTIP
HLVRKRDVHVVEFHRQSPAKILNCTNIECLQISCAVGQLEGGESAVLKVRSRLWAHTFLQ
RKNDPYALASLVSFEVKKMPYKDQPAKLPEGSIAIKTSVIWATPNVSFSIPLWVIILAIL
LGLLVLAILTLALWKCGFFDRARPPQEDMTDREQLTNDKTPEA
Download sequence
Identical sequences A0A2I2YGH9
XP_004049142.1.27298 ENSGGOP00000014812 ENSGGOP00000014812

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