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Domain assignment for XP_004268950.1.21590 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004268950.1.21590
Domain Number 1 Region: 38-127
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.01e-38
Family SCAN domain 0.0000499
Further Details:      
 
Domain Number 2 Region: 368-425
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.29e-24
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 3 Region: 275-327
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.12e-19
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 4 Region: 414-466
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.19e-19
Family Classic zinc finger, C2H2 0.0031
Further Details:      
 
Domain Number 5 Region: 313-369
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.4e-18
Family Classic zinc finger, C2H2 0.0087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_004268950.1.21590
Sequence length 473
Comment PREDICTED: zinc finger and SCAN domain-containing protein 21 [Orcinus orca]; AA=GCF_000331955.2; RF=representative genome; TAX=9733; STAX=9733; NAME=Orcinus orca; AL=Scaffold; RT=Major
Sequence
MMTKVLGMATVLGPRTPQEQGPVIVKVEEEEKGKRLPSLETFRQRFRQFGYHDTPGPREA
LSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLLED
LERELDEPAQQASPPPSEQKQWWEKMASSGTVEESLSSPQPRSVETSYKYESWGPLYIQE
TGEEEDFTPELTKIQDRKSNTQNEESTDKQESSEEFHAEGFRRDSIPMIIANKCEARLER
QWVNLEKGRGTKIPLQDKGPSKGREVMTKPAPAERRYICAECGKAFSNSSNLTKHRRTHT
GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
CGKAFNHSSNFNKHHRIHTGEKPYWCNNCGKTFCSKSNLSKHQRVHTAEGEGP
Download sequence
Identical sequences XP_004268950.1.21590 XP_012388113.1.21590

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