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Domain assignment for XP_004284340.1.21590 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004284340.1.21590
Domain Number 1 Region: 337-435
Classification Level Classification E-value
Superfamily tRNA-intron endonuclease catalytic domain-like 7.32e-27
Family tRNA-intron endonuclease catalytic domain-like 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004284340.1.21590
Sequence length 465
Comment PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform X1 [Orcinus orca]; AA=GCF_000331955.2; RF=representative genome; TAX=9733; STAX=9733; NAME=Orcinus orca; AL=Scaffold; RT=Major
Sequence
MAEAVFRPPKRKRRVYESYESPLPIPFGQDCGPEKDFRIFRAEMINNNVIVRNAEDMEQL
YGKGYFGKGILSRSRPNFTTSDPKLVAKWKDVKTDMPVITSKKYQRSVEWATNLMRRQGQ
DESTVRRLLEDYTKPLQHLCLQRNEEVQLCNELNSEMVSKTEGTADREKLSAMNGVAGKS
HDLEDPSKRSDCLHDSRPDPIPTHGSGEHVAEVTAPLPHVHWGKQDVLLPPSGAQPGDSS
QRAGLVLARERGPEHHCVLVEEVVCDVSEREDASGGNMSPKKRLICRRNPFRIFEYLQLS
LEEAFFLVYALGCLSIYYEKEPLTIVKLWNAFRVVQPTFRTTYMAYHHFRSKGWVPKPGL
KYGTDLLLYRKGPPFYHASYSVIIELVDDRFEGSPRRPLSWRSLAALSRVSVSVSKEFML
CYLIKPSTMTDKEMESPECMKQIKVQEVILSRWVSSRERSDQDEL
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Identical sequences XP_004284340.1.21590

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