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Domain assignment for XP_004285231.1.21590 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004285231.1.21590
Domain Number 1 Region: 42-482
Classification Level Classification E-value
Superfamily Sema domain 2.75e-119
Family Sema domain 0.000000848
Further Details:      
 
Domain Number 2 Region: 478-504
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000112
Family Plexin repeat 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004285231.1.21590
Sequence length 924
Comment PREDICTED: semaphorin-6C isoform X2 [Orcinus orca]; AA=GCF_000331955.2; RF=representative genome; TAX=9733; STAX=9733; NAME=Orcinus orca; AL=Scaffold; RT=Major
Sequence
MPRDPRFMPLLLLLLLLSLPHTQAAFPQDPLPLLTSDLQGISPLSWFRGLEDDAVVAELG
LDFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKYLTWRSQDMENCAVRGKLTDE
CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAV
FAEPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSF
LKLRLNCSVPGDSTFYFDVLQALTGPVNLYGRSALFGVFTTQTNSIPGSAVCAFYLDDIE
RGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKAHP
LLDPAVPPATHQPLLTFTSRALLTQVAVDGMAGPYSNTTVLFLGSNDGTVLKVLPPWGQS
GGPEPILLEEIDAYSPSRCSGKRAAQTARRVTGLELDTEGHRLFVAFSGCIIYLPLSRCA
RHGACRRSCLASQDPYCGWDSSRGCVDIRGPGGIDVHPAGNQESMEHDDCQDGATGSQSG
TGDSAYVLLSPGPSPETPSPPSDAHPRPQSSTLGAHTQGVRRDLPPASVSRAVPIPLLLA
CVAAAFALGASVSGLLVSCACRRAHRRRSKDIETAGLPRPLSLRSLARLHGAGPEPQPTS
KDGGGAQTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRHAGGPWEWNQNGNNA
KEGRGRARGGNTAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKEVEPPA
AAPFTSRALPPEPAPALFAGPCLLPRDCATPRRLDVPPEGKRPAPATRPALSAPAPRLGV
GGSRRLPFSTHRAPPALLTRVPSGGPSRYSGGAGRHLLYLGRPEGHRGRALKRVDVEKPQ
VPLKPPLVGPSSQSAVPSGNHFNF
Download sequence
Identical sequences XP_004285231.1.21590

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