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Domain assignment for XP_004337485.1.79595 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004337485.1.79595
Domain Number 1 Region: 995-1219
Classification Level Classification E-value
Superfamily Rap/Ran-GAP 3.92e-52
Family Rap/Ran-GAP 0.00035
Further Details:      
 
Domain Number 2 Region: 1473-1562
Classification Level Classification E-value
Superfamily Outer arm dynein light chain 1 0.000000000000248
Family Outer arm dynein light chain 1 0.0058
Further Details:      
 
Domain Number 3 Region: 211-380,480-772
Classification Level Classification E-value
Superfamily ARM repeat 0.0000282
Family Armadillo repeat 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_004337485.1.79595
Sequence length 1736
Comment leucine rich repeat-containing protein [Acanthamoeba castellanii str. Neff]; AA=GCF_000313135.1; RF=representative genome; TAX=1257118; STAX=5755; NAME=Acanthamoeba castellanii str. Neff; strain=Neff; AL=Scaffold; RT=Major
Sequence
MEASGASRGHRRRGSAIELKEHVLENGARLLSFVEILEGCSTAEGQRVFFTTHSHAFYRS
LLASVLGVSDVMDEEEAVQLLGIFLAFVNSTSDRRSFRVWWVPFRSRFLEVAYPTPAGTR
LRSLSVDAWLSSDSSPRSRRPNSMLHIILCMLVDWTKHPHHARAMLLLNRPSGEQQRPPQ
EEGEEEMEKKTKEEEEGSADDSEQEQEAVDNDTAQYLLDLCGHLCTTLPLVDESLPMLRP
LMQLYHNLAVDFFARLGRLLVAKDSTGLRAMGKETYIDTVENQLPTYDTQTRTLIARQSS
AMFPVLTIVIFSDFFFSSLCELLEDQIQYHLNYPPSPALDEQLRLLIQFHYALKQYFSIP
TLHYAYLSVLEDWGRTIAELTAQDAFSESTQQWQRSGKSDFLDHMLLISRRLLEILPGLS
GLIAAPSSLMAFLKRLGDVLEVHIKPFMTKQRYQHIANESEDGLHIVKLTYEPLLALVER
EKPELLACRGEALRLICRLFLPASRLLQSKSLWDAFFGTVHNHTEDLFSARFDDCPSLIE
CYCTAIRTFLADDMAKSDQIRPSAVRVLCRILNVVLRGALPTLAPGCLPVMPPLDKLHAL
GDIVGMVLRVIEEETDSRNKVECLSTLSATLVALLEIHCLYPHCAFDDDEGADTVVQQHG
NVQENEQRQAQMYVRRLIEQMLAILKSSCSFMETPEVVAVAVSSLSVLTSIYPTLMFTRD
PLGNIRSIIEMLCQNAIDSGPELWKYYCLGLREWLSLPFPFLHDEALVSLLFSTLEMCIL
PDPLADPAPPSFSSLLSLVCPMFPLMVPISPTALLSSTSSSFSPIPHPLPVPASSSYLDQ
AGAVFNSLYQRLLHFEETEPQEAKERCRLTEGRAEALLLHLLYAYNFRKGNPFVSLSRTS
STALSAVAQHSAFYSWGSSVFLVREDRVGEEIITTAQVHNGTGSFGYRGDALREVVLPRN
PPQGKKILDQLQPTVRLPLPHAALVAPAEDTHVTPHAIHATVDSMERFVRRLTGLPEKDV
FKVGVVYVGPGQDHQSDILANSTCSSAFRTFMSQIGSTVYLPHHTGYAGGLSVEQELEMP
FSTTPTTELMFHVAPFFPTATDDPQQVHKKRHIGNDELNVVWSENDVDYDISTLRTKVTC
LYIILYPLRRGFVRVQLKSTKPGPFLWGPLQDGMIVPTQSLATLVRWTIINVEVELLRTA
PFCNAYIRRKEQVLESLQRWRQERDPKLHQADVALAVLPTKERQVILEGLQLTSLPWSLI
ESPSSATTSSSSLRSRSLSSLLSSLDPSSSATLTTSPSSESLSALPSPATTSPSSSSVSS
TPSNNRKGSAALPGLAPHSFGGAGGESRADDNWSCQLHQADVALAVLPTKERQVILEGLQ
LTSLPWSLIESPSSATTSSSSSSSLRSRSLSSLLSSLDPSSSATLITSPSSESLSALPSP
ATTSPSSSSVSSTPSNNRKGSAALPGFEEGPITHLSLSFNRLAGLQLSGALGGLEELRLS
HNRLAKLARLEGLIELRRLRCLDLSHNLLADLSLLAACLAQGKLARLERLFLHNNRIAFL
PLHFVAMFGGDARGKDKASRYSECELGSISLDHNPLLLPTADATATETAQATLNGELPGV
TTPPTLRAMCWQLAVQRGTASSTSRWAGDEQLIRQLRSILDEGRAAARECSLCGCAYIGA
PVATARRPWAGSLLGQPARNFTVGGDACSLSCARLLQTQLARAASAAVGAGNAGEM
Download sequence
Identical sequences L8GRA8
XP_004337485.1.79595

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