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Domain assignment for XP_004353560.1.79595 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004353560.1.79595
Domain Number 1 Region: 600-931
Classification Level Classification E-value
Superfamily Rap/Ran-GAP 5.23e-70
Family Rap/Ran-GAP 0.0000104
Further Details:      
 
Domain Number 2 Region: 255-479
Classification Level Classification E-value
Superfamily L domain-like 8.33e-33
Family Internalin LRR domain 0.0087
Further Details:      
 
Domain Number 3 Region: 99-200
Classification Level Classification E-value
Superfamily SH2 domain 0.0000000000175
Family SH2 domain 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_004353560.1.79595
Sequence length 966
Comment Rap/ranGAP domain containing protein [Acanthamoeba castellanii str. Neff]; AA=GCF_000313135.1; RF=representative genome; TAX=1257118; STAX=5755; NAME=Acanthamoeba castellanii str. Neff; strain=Neff; AL=Scaffold; RT=Major
Sequence
MDGSGVVNLNNGTEDNNWEPFREKVWATALAVAKLDPQSQPKNERDATFGMTAIPVHKFC
ASYLSSVGGTHTEVDQICLSVIFSDHGEEEEEFPLVSKKQWFHGKQSRQASERLLMESGR
EGDFLMRYSSVEGAFTVDYIKRQKICHFNNIRNDAGGGVCVLVGKTPEQQKAYKFTSMSA
FITKNEHIFVNPCLNPRSHFQWLKLRIPDNPSERGAEAKADVDEDEEDSSDDEHEDPSQS
KVPLEERIKNAIQNSFQKHKTTLSLKNLGMGPTLPLHICRLNYVVYLDLSRNKLTELPED
LSALRLLKRLNVSANKLTSLPGSIFASFPRLHSLIGAENQITEIPEGLFKATTLSYLDLS
SNKISKARTRTTPPHTHHRTRTTAHAPCVPAAVNELTQLGFLELSNNQIDAVPALDKLEK
LEELYVNDNQLREISGSLASLPALMHLDISSNQVTHIPKEILSLVSDNNAFCIVVDNNPL
VEEDKSKLLALLQANKNRDRAESRTKGSRDILGVIRVNSEKLQDVATKSRSRAMPSEGSA
TLRPHKDKERGGGDDDGDGEGRSQGKSMWTNGFGFKIEEGRGPRPQSKDLHLQEHINVFD
YRRYFYHQTVHANIIGNDKQLGQICISIQKEPTMSTMVNLGEQPYPVYRVLLRTKQNDRR
LEIRAAEVKIRKKEKYARSDDLMDALKKLLQPFSPRHLWVIRDKRSHREFALLEDKLKSN
CSKFGVIYGRDGQDETQMYNNEHGSEVFEDFLSSLGDRINMKGWDKYRGDFSNKADQKSL
YTVFGDHEIMFHVMTYILMMKNTDQYGQQWERKRFIGNDIVVIVFYEGKKPLDPNIFVSN
FNHVFALVVPEERNGTTYYALHMAYKVGVAESKPPLPEEAVWERGPEFREFLLTKLINAE
RCAMSATQFRRPQEKVRAELFENLQTKFPKKSARGIARSKATDDGSQISPEYLDKETADA
IAQIRG
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Identical sequences L8HFL0
XP_004353560.1.79595

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