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Domain assignment for XP_004419556.1.5094 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004419556.1.5094
Domain Number 1 Region: 30-461
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 4.97e-83
Family Integrin alpha N-terminal domain 0.000001
Further Details:      
 
Domain Number 2 Region: 461-620
Classification Level Classification E-value
Superfamily Integrin domains 9.94e-31
Family Integrin domains 0.0018
Further Details:      
 
Domain Number 3 Region: 624-762
Classification Level Classification E-value
Superfamily Integrin domains 1.2e-27
Family Integrin domains 0.0038
Further Details:      
 
Domain Number 4 Region: 768-982
Classification Level Classification E-value
Superfamily Integrin domains 7.32e-16
Family Integrin domains 0.0079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_004419556.1.5094
Sequence length 1035
Comment PREDICTED: integrin alpha-9 [Ceratotherium simum simum]; AA=GCF_000283155.1; RF=representative genome; TAX=73337; STAX=9807; NAME=Ceratotherium simum simum; AL=Scaffold; RT=Major
Sequence
MGGPAARRGAGGLRALLLALVAAGTPAGAYNLDPQRPVRFQGPAGSFFGYAVLEHFHDNT
RWVLVGAPKADSKYSTSVKSPGAVFKCRVHTNPDRRCTELDMARGKNRGMPCGKTCREDR
DDEWMGVSLARQPKADGHVLACAHRWKNIYYETDHILPHGFCYIIPSNLQAKGRMLIPCY
EEYKKKYGEEHGSCQAGIAGFFTEELVVMGAPGSFYWAGTVKVLNLTDNTYFKLNDEAIM
NRRYTYLGYAVTAGHFSHMSTTDVVGGAPQDEGVGKVYIFRADRRSGTLIKIFQASGKKM
GSYFGSSLCAVDLNADGLSDLLVGAPMFSEIRDEGQVTVYINRGNGALEEHLALNGDGTY
NAHFGESIASLGDLDDDGFPDVAIGAPKEDDFSGAVYIYHGDAGGIVPQYSMKLSGRKIS
PVLRMFGQSISGGIDMDGNGYPDVTIGAFMSDSVVLLRARPVITVDVSIFLPASINITAP
QCHDGQQPVNCLNVTACFSFHGSHVPGEIGLNYVLTADVAKKEKGQLPRVYFVLLGESMG
QVSEKLQLVHVEETCHHYVAHVKRRVQDVISPIVFEAAYSLGEHVTGEEERELPALTPVL
RWKKGQKIAQKNQTVFERNCRSEDCAADLQLRGQLLLSSIDEKTPYLALGAVKNISLNIS
ISNLGDDAYDANVSFNVSRELFFINMWQKEEMGISCELLESDFLKCSVGFPFMRSKSKYE
FSVIFDTSHLSGEEEVLSFIITAQSGNVERSDSLHDNTLMLMVPLMHEVDTSITGIMSPT
SFVYGESVDASNFIQLDDLECHFQPLNVTLQVYNTGPSTLPGSSVNISFPNRLSPGGAEM
FHVQEMVVGQEKGNCSFQKNPTPCIIPQEQENIFHTIFAFFTKSGRKVLDCEKPGISCLT
MHCNLSALAKEESRTIDIYMLLNTEILKKDSSSVIQFMTRAKVKVDPALRVVEIANGNPE
EMTVVFEALHNLEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYKEIIEAEKN
RKENEDSWDWVQKNQ
Download sequence
Identical sequences XP_004419556.1.5094

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