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Domain assignment for XP_004425395.1.5094 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004425395.1.5094
Domain Number 1 Region: 38-483
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 1.83e-97
Family Integrin alpha N-terminal domain 0.000000000559
Further Details:      
 
Domain Number 2 Region: 784-1014
Classification Level Classification E-value
Superfamily Integrin domains 2.3e-63
Family Integrin domains 0.00000514
Further Details:      
 
Domain Number 3 Region: 484-642
Classification Level Classification E-value
Superfamily Integrin domains 1.46e-46
Family Integrin domains 0.0000125
Further Details:      
 
Domain Number 4 Region: 643-777
Classification Level Classification E-value
Superfamily Integrin domains 8.89e-36
Family Integrin domains 0.0000135
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004425395.1.5094
Sequence length 1062
Comment PREDICTED: integrin alpha-8 [Ceratotherium simum simum]; AA=GCF_000283155.1; RF=representative genome; TAX=73337; STAX=9807; NAME=Ceratotherium simum simum; AL=Scaffold; RT=Major
Sequence
MSAGARRGPRGSRAQPRAPLWCFAAALGMLWSPASQAFNLDVDKLTVYSGPEGSYFGYAV
DFHIPTARTASVLVGAPKANTSQPDIMEGGAVYYCPWPAEGSAQCKQIPFDTTNNRKIRV
NGTKEPIEFKSNQWFGATVKAHKGKVVACAPLYHWRTLKPTPEKDPVGTCYVAIQNFSAY
AEYSPCRNSNADPEGQGYCQAGFSLDFYKNGDLIVGGPGSFYWQGQVITASIADIIANYS
FKDILRKLAGEKQTEVAPASYDDSYLGYSVAAGEFTGDSQQELVAGVPRGAQNFGYVSII
NSTDMTFIHNFTGEQMASYFGYTVAVSDVNNDGMDDILIGAPLFMEREFESNPKEVGQVY
LYLQVSSLVFRDPQVLAGTEVFGRFGSAVAHLGDLNQDGYNDIAIGAPFAGKDQRGKVLI
YNGNKDGLNTKASQILQGVWASQAVPSGFGFTLRGDSDIDKNDYPDLIVGAFGTGKVAVY
RARPVVTVDAQLLLHPMIINLENKTCQIPESMTSVACFSLRVCASAAGQSISNTIGLTAE
VQLDSLKQKGAIKRTLFLANHQSHLVFPLVIKQQNSLQCQDFVVYLRDETEFRDKLSPIN
ISLNYSLDESTFTEGLDVKPILNHYRENVVTEQAHILVDCGEDNMCIPDLKLSARPDKHQ
VIIGDENHLMLIINARNEGEGAYEAELLVIIPEEADYVGIEHSNKALRPLSCEYKMENVT
RMVVCDLGNPMVAGTNYSLGLRFTVPRLEKTNMSINFDLQIRSSNKDNPDSNFVSLQINI
TAVAQVEIRGVSHPPQIVLPIHNWEPEEEPHEEKGVGPLVEHIYELHNIGPSSISDTLLE
VGWPFSARDEFLLYIFHIQTLGPLRCQTNPDINPQDIKPAAPPEDTPELSAFLRNSTIPH
LVRKRDVPVPELHRQSPAKILNCTNIECLQISCVVGRLEGGESVVLKVRSRLWAKTFLQR
KNDPYSLASLVSFEVRKMPYKDQPAKLPEGSIAIKTSVIWATPNVSFSIPLWVIILAILL
GLLVLAILTLALWKCGFFDRARPPQDDMNDREQLTNEKTPDA
Download sequence
Identical sequences XP_004425395.1.5094

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