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Domain assignment for XP_004578202.1.84141 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004578202.1.84141
Domain Number 1 Region: 46-273,322-425
Classification Level Classification E-value
Superfamily Cysteine proteinases 1.39e-129
Family Calpain large subunit, catalytic domain (domain II) 0.00000000548
Further Details:      
 
Domain Number 2 Region: 429-579
Classification Level Classification E-value
Superfamily Calpain large subunit, middle domain (domain III) 3.01e-57
Family Calpain large subunit, middle domain (domain III) 0.00000164
Further Details:      
 
Domain Number 3 Region: 635-819
Classification Level Classification E-value
Superfamily EF-hand 2.73e-51
Family Penta-EF-hand proteins 0.00000768
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_004578202.1.84141
Sequence length 820
Comment PREDICTED: calpain-3 isoform X1 [Ochotona princeps]; AA=GCF_000292845.1; RF=representative genome; TAX=9978; STAX=9978; NAME=Ochotona princeps; AL=Scaffold; RT=Major
Sequence
MPTAISASVAPQTGAEPRSPGPVSHPAQGKTTEAGGGNPSGIYSAILSRNFPIIGVKEKT
FEQLHKKCLEKKVLYLDPEFPPDETSLFYSQKFPIQFVWKRPPEICENPRFIIGGANRTD
ICQGDLGDCWFLAAIACLTLNERLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDD
CLPTYNNQLVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFE
IKDAPRDMYKIMRKAIERGSLMGCSIDDGTNMTFGTSPSGLNMGELIARMVRNMDNSLLR
DSDLIPQGSDDRPTRTIVPVQYETRMACGLVRGHAYSVTGLEEALFKGEKVKLVRLRNPW
GQVEWNGSWSDGWKDWSFVDKDERARLQHQVTEDGEFWMSYEDFIFHFTKLEICNLTADA
LESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICSF
LVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYINM
REVSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEAENTISVDRPVKKKKAK
PIIFVSDRANSNKELCVDQESEGKDKTSPDKQEPSPQPQPGNTNWESEEQQQFRNIFKQI
AGDEMEICADELKNVLNTLVKKDQDLKMQGFTLESCRSMIALMDTDGSGRLNLQEFHHLW
KKIKAWQKIFKCYDTNHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFDS
FICCFVRLEGMFRAFHAFDKDGDGVIKLNVLEWLQLTMYA
Download sequence
Identical sequences XP_004578202.1.84141

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