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Domain assignment for XP_004682146.1.23501 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004682146.1.23501
Domain Number 1 Region: 303-415
Classification Level Classification E-value
Superfamily ARID-like 2.49e-34
Family ARID domain 0.00032
Further Details:      
 
Domain Number 2 Region: 564-670
Classification Level Classification E-value
Superfamily Chromo domain-like 1.33e-18
Family Chromo barrel domain 0.011
Further Details:      
 
Domain Number 3 Region: 59-113
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 0.000000000552
Family Tudor domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_004682146.1.23501
Sequence length 1260
Comment PREDICTED: AT-rich interactive domain-containing protein 4A [Condylura cristata]; AA=GCF_000260355.1; RF=representative genome; TAX=143302; STAX=143302; NAME=Condylura cristata; AL=Scaffold; RT=Major
Sequence
MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL
RVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIAKKTNRGRRSSLPITEDEKEEESSEEEDEDKRRLNDELLGKVVS
VVSTSEKTEWYPALVISPSCNDDVTVKKDQCLVRSFVDSKFYSIARKDIKEVDILNLPES
ELSDKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDEEDGPAEENEEEKEKEAKKEEE
EVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNID
SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEE
QKDLEESMEETLTVDQEMPLVEVKSEPEENIDSNSESDREEIELKSPRGRRKIARDANSI
KKEIEDEKTEDRLKDNDTENKDVDDDYESAEKKENELLLGRKNTPKQKEKKMKKQEDSDK
DSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTE
IDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKVKNKEDSEKDEKRDEE
RQKSKRGRPPLKSTLSSNMLYALSKTPNSEGKSDSCSSDSETEDLLEKNLMNEELSPEIK
EELEKNENLNDDKLVEENPKITTHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKVEQ
VEEVKKEAEKSPKGKGRRSKTKDLPLEIIKISSLSSQDEAGNEPHTEAQSLELSSLDSKS
FSSTTEDEIDQCAKEKKMKRKILGQSSPEKKIRIENGMEITNSASQERTGDCVAPVGTKN
LNFEQHFEIENEGMPSLTAESNQCTQELTSEKFESPVEETINTPLKEEEDAMPLIGPETL
VCHEVDLDDLDEKDKTSIEDVVVESSESNSLVSIPSALPSAVQHNFSVASPLTLSQDESR
SIKSESDITIEVDSIAEESQEGLCERESANGFEANVASGTCSITVQERESREKGQKRPGD
GNSGLLAKKQKRAPKRTSAVAKNEKNGTGQSSDSEDLPVLDSSSKCTPVKHLSVSKPQKL
VRSPARISPHIKDGEKEKHREKHPNSSPRTYKWSFQLNELENMNSTERISFLQEKLQEIR
KYYMSLKSEVATIDRRRKRLKKKDREVSHAGASMSSASSDTGMSPSSSSPPQNVLAVECR
Download sequence
Identical sequences XP_004682146.1.23501

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