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Domain assignment for XP_004737959.1.14098 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004737959.1.14098
Domain Number 1 Region: 27-146,338-646
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 6.02e-71
Family Integrin alpha N-terminal domain 0.0000521
Further Details:      
 
Domain Number 2 Region: 166-361
Classification Level Classification E-value
Superfamily vWA-like 8.25e-52
Family Integrin A (or I) domain 0.0000000196
Further Details:      
 
Domain Number 3 Region: 930-1132
Classification Level Classification E-value
Superfamily Integrin domains 1.99e-40
Family Integrin domains 0.0021
Further Details:      
 
Domain Number 4 Region: 789-926
Classification Level Classification E-value
Superfamily Integrin domains 3.35e-25
Family Integrin domains 0.003
Further Details:      
 
Domain Number 5 Region: 649-788
Classification Level Classification E-value
Superfamily Integrin domains 2.04e-17
Family Integrin domains 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_004737959.1.14098
Sequence length 1178
Comment PREDICTED: integrin alpha-2 isoform X1 [Mustela putorius furo]; AA=GCF_000215625.1; RF=representative genome; TAX=9669; STAX=9668; NAME=Mustela putorius furo; breed=Sable; AL=Scaffold; RT=Major
Sequence
MRPARTGGAPLRLLLVLSQGILNCMAYNVGLLGAKVFSGPSSEQFGYAVQQFVNPDGNWL
LVGSPWSGFPENRMGDVYKCPVDLSTATCEKLNLETSTSIPNVTEMKTNMSLGLTLTRNM
GTGGFLTCGPLWAQQCGSQYYTTGVCSDVSPDFQLLTSFAPAVQTCPSLIDVVVVCDESN
SIYPWEAVKNFLEKFVQGLDIGPKKTQVGLIQYANEPRVVFNLNTFKTKAEMIEATSQTY
QYGGDLTNTFKAIQYAKDSAYAATAGGRPGATKVMVVVTDGESHDGSMLKAVIDQCNKDN
ILRFGIAVLGYLNRNALDTKNLIKEIKAIASIPTERYFFNVSDEAALLEKAGTLGEQIFS
IEGTVQGGDNFQMEMSQVGFSADYSPQNDVLMLGAVGAYAWSGTVVQQTSHGHLIFPNQA
FDQILQDKNHSSYLGYSVAAISTGKDIHFVAGAPRANYTGQIVLYSVDENGNVTVIQAHR
GDQIGSYFGSVLCSVDVNKDTITDVLLVGAPMYMNDLKKEEGRVYLFTITRGVLNWHQFL
EGPKGVENARFGSAIAALSDINMDGFNDVIVGSPLENQNSGAVYIYNGHEGTIRTRYSQK
ILGSDGAFRSQLQYFGRSLDGYGDLNGDSITDVSIGAFGQVVQLWSQSIADVSVDASFTP
EKITLFNKNADIKLTLCFSAKFRPPKQNDQVAIVYNITIDANLYSSRVTSRGLFKENNER
CLQKNMLVSQAQSCTEYTIHIQKPSDVVSSLDLCVNISLENPGTSPALEAYSEKAKVFSI
PFYKDCGDDGVCISDLVLDVQQLSAAQDQLFIISNQNRRLTFSVTLKNKRESAYNTRIVV
DFSENLFFASWSMPVDGTEVTCQIASSQKTVTCDVGYPALKREQQVTFTINFDFNLQNLQ
NQASVSFQALSESQEESKADNLVNFKIPLRYDADIHITRSTNINFYEVSSDGNVPSVVHS
FEDIGPKFIFSIKVTTGSVPVSMASVTIHIPRDTKGQNPLMYLTGVHTDQAGDISCNAEI
NPLKIGHTSPSVSFKNENFRHIKELNCRTASCSNVTCWLKDLQVKGEYFLNVSTRIWNGT
FAASTFQTVQLTASAEIDTYNPQIYVIEENTVMIPIMIMKPHEKAEVPTGVIVGSVIAGI
LLLLALVAVLWKLGFFKRKYEKMSKNADEIDETTELNS
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Identical sequences M3YSD9
ENSMPUP00000014249 XP_004737959.1.14098 ENSMPUP00000014249

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