SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_004961988.1.39314 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_004961988.1.39314
Domain Number 1 Region: 359-521
Classification Level Classification E-value
Superfamily CRAL/TRIO domain 4.71e-38
Family CRAL/TRIO domain 0.00081
Further Details:      
 
Domain Number 2 Region: 95-124,308-347
Classification Level Classification E-value
Superfamily CRAL/TRIO N-terminal domain 0.000000000000262
Family CRAL/TRIO N-terminal domain 0.0024
Further Details:      
 
Domain Number 3 Region: 531-631
Classification Level Classification E-value
Superfamily Supernatant protein factor (SPF), C-terminal domain 0.00000012
Family Supernatant protein factor (SPF), C-terminal domain 0.0089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_004961988.1.39314
Sequence length 638
Comment PREDICTED: patellin-3-like [Setaria italica]; AA=GCF_000263155.2; RF=representative genome; TAX=4555; STAX=4555; NAME=Setaria italica; strain=Yugu1; AL=Chromosome; RT=Major
Sequence
MADETKQETAAAAVAAEVVVTEPEKKAEEPAAEKAVEAAEEKAAEAAVEKAVEAEEKAAE
ADSEEEKKAEEALEAAAGDEAAVIDAAGSFKEESNLVSELPDPEQTALAQLKELVAAALA
NGEFDLPPPPPPKEEPKKEEPAKEEAKDEAKPAKDEEPKAEAAAAEEPAKEEAKAEEPKT
EAPAEAAVEEVKAEAPAPEEPKAEAAPAEEPKAEEPAKEEPMAEAATEEPKAEAAAEEAK
PSEPEPEEKTVVVAEEEATKTVEAIEETVVPAASETAASAEAEAAPGPAAERKEELIWGV
PLVGDDERTDTVLLKFLRAREFKVKEAMAMLKSAVLWRKRFGIDELLGADLGLPELENVV
FYRGADREGHPVCYNVYGEFQDKELYEKAFGDEEKRERFLKWRIQLLERGIREQLDFSPS
GICSMVQVTDLKNSPPMLGKHRAVTRQALALLQDNYPEFVAKKVFINVPWWYLAANKVMS
PFLTQRTKSKIVFCSPGKSAETLFRYIAPEQVPVQFGGLYKEDDTEFSTSDAVTELTVKP
SSKETIEIPATENSTVVWELRVLGWEVSYGAEFTPDAEGGYTVIVQKTRKVPAHEEPIMK
GSFKVSEPGKVVLIVNNPASKKKKLLYRFKVKSTAESA
Download sequence
Identical sequences XP_004961988.1.39314

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]