SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_005011522.2.99704 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_005011522.2.99704
Domain Number 1 Region: 312-367,396-600
Classification Level Classification E-value
Superfamily Clavaminate synthase-like 2.75e-39
Family PhyH-like 0.079
Further Details:      
 
Domain Number 2 Region: 28-140
Classification Level Classification E-value
Superfamily ARID-like 1.44e-30
Family ARID domain 0.00066
Further Details:      
 
Domain Number 3 Region: 250-312
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 2.88e-17
Family PHD domain 0.0021
Further Details:      
 
Domain Number 4 Region: 1102-1185
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000000000266
Family PHD domain 0.0096
Further Details:      
 
Domain Number 5 Region: 1565-1625
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000000000031
Family PHD domain 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_005011522.2.99704
Sequence length 1655
Comment PREDICTED: lysine-specific demethylase 5A isoform X1 [Anas platyrhynchos]; AA=GCF_000355885.1; RF=representative genome; TAX=8839; STAX=8839; NAME=Anas platyrhynchos; breed=Pekin duck; AL=Scaffold; RT=Major
Sequence
MKFCFKFPQLFPGSYILQDWQPPFACEVQSFRFTPRIQRLNELEAMTRVKLDFLDQLAKF
WELQGSNLKIPVVERKILDLYGLSKIVASKGGFEVVTKEKKWSKVASRLGYLPGKGTGSL
LKSHYERILYPYELFQSGVSLMGIQKPNLDLKEKVEAEDLSSDAQASPKQGSRMNVVLKR
TRRVKSQAETGEMSRNTELKKLQIFGAGPKMMGLALGAKDKEDEVTRRRKGTRSEAFGMQ
MRQRKGTLSVNFVDLYVCLFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCP
KCVAEECNKPREAFGFEQAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLV
SSIEEDVIVEYGADISSKDFGSGFPVKDGRRKLMPEEEDYALSGWNLNNMPILEQSVLAH
INADISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEDVM
KELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGY
NFAEAVNFCTADWLPIGRQCVSHYRRLGRHCVFSHEELIFKMAADPECLDVGLAAMVCKE
MTLMIEEETRLRESVVQMGVLMSEEEVFELVPDDERQCTACRTTCFLSALTCSCNPERLV
CLYHPSDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANLNHKK
DVIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASVAQLLLSKKQKHSRQSQDSGRT
RTKLTMEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDEIPDSSKLQEL
IDMGSGLYVELPELPRLKQELQQARWLDEVRSTLLDPQRVTLDVMKKLIDSGVGLAPHHA
VEKAMAELQELLTVSERWEEKAKVCLQARPRQSMMALEGIVNEAKNIPAYLPNVLALKEA
LQRARDWTAKVEAIQNGSNYAYLEQLENLSAKGRPIPVRLDALPQLESQVAAARAWRERT
GRTFLKKNSSYSLLQVLSPRTDIGVYGSSKNRRKRAKELMEKEKEKDLDLESLSELEDGL
EEARDTAAVVAVFKEREQKEIEAMHALRAANLAKMTMVDRIEEVKFCICRKTASGFMLQC
ELCKDWFHSGCVPLPKTSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLP
VRLPEGEALQCLTERAMSWQDRARQALATDELSSALAKLSVLSQRMVEQAAREKTEKIIS
AELQKAAANPDLQGHLTSFQQSAFNRVIGSVSSSPRQTLDYDDEETDSDEDIRETYGYDI
KDNASVKSSSSLEPNLFCDEEIPIKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPR
KQPRKSPLVPRSLEPPVLELSPGAKAQLEDLMMVGDLLEVSLDETQHIWRILQATHPPSE
DRFLHVMEDDSMDEKPLKMRGRDSSERKRKRKLERAEQFFGDMKQKSKELKKLEKPKKKK
LKLTMDKTKELNKLAKKLAKEEERKKKREKAVVAKVELTKDSTEKKREKKVLDIPSKYDW
SGAEESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICIN
CAKKPMQGPSSPAHAPPPPFLLSYKLPLEDLKETS
Download sequence
Identical sequences XP_005011522.2.99704

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]