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Domain assignment for XP_005109627.1.21191 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005109627.1.21191
Domain Number 1 Region: 92-405
Classification Level Classification E-value
Superfamily WD40 repeat-like 6.11e-100
Family WD40-repeat 0.000000000134
Further Details:      
 
Domain Number 2 Region: 2-74
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 7.06e-22
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0000698
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005109627.1.21191
Sequence length 408
Comment PREDICTED: lissencephaly-1 homolog [Aplysia californica]; AA=GCF_000002075.1; RF=representative genome; TAX=6500; STAX=6500; NAME=Aplysia californica; AL=Scaffold; RT=Major
Sequence
MVLSQRQKDELNKAIADYLLSNGFNSALEHFQKEAGMPQEIEKKFSGLLEKRWTSVIRLQ
KKVMDLETKLSEAEEEVNSGAPTRDRRSPGEWIPRPPERYSLTGHRSPITRVVFHPVFSV
MVSCSEDATIKVWDYETGDYERTLKGHTDSVQDVAFDNSGKYLVSCSADMTIKLWDFNGY
ECMKTMYGHDHNVSSVTFMPSGDFVVSSSRDKTIKMWEVSTGYCVKTYTGHREWVRMVKV
YQDGSLLASCSNDQTVRVWVTATKECKAELREHEHVVECIAWAPESAQPAINEAAGTESK
NAKRSGPFLLSGSRDKTMKMWDVSVGLCLFTLSGHDNWIRGVVFHPGGKYILSASDDKTI
RVWDTQNKRNHKTLQAHPHFVTSIDMHRNSPFVITGSVDQSVKVWECR
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Identical sequences XP_005109627.1.21191

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