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Domain assignment for XP_005236546.1.75256 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005236546.1.75256
Domain Number 1 Region: 156-554
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 4.84e-74
Family Integrin alpha N-terminal domain 0.00000513
Further Details:      
 
Domain Number 2 Region: 554-716
Classification Level Classification E-value
Superfamily Integrin domains 7.85e-29
Family Integrin domains 0.0014
Further Details:      
 
Domain Number 3 Region: 719-856
Classification Level Classification E-value
Superfamily Integrin domains 6.8e-27
Family Integrin domains 0.0048
Further Details:      
 
Domain Number 4 Region: 864-1077
Classification Level Classification E-value
Superfamily Integrin domains 7.32e-16
Family Integrin domains 0.0089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_005236546.1.75256
Sequence length 1130
Comment PREDICTED: integrin alpha-9 [Falco peregrinus]; AA=GCF_000337955.1; RF=representative genome; TAX=8954; STAX=8954; NAME=Falco peregrinus; AL=Scaffold; RT=Major
Sequence
MGESWLVSQETSLDKTETMPASERKCCIGSIFHPDKTFWILSLFGKLAERYEKEYDQAFT
EGLPALKGDATCSSVFLRQLPNSPTIPHSSLGCLSLVGTKNSLQIAPVGMFFFEGEVGLG
GESQRYPTLFGNDAGLAALGIRLTAGVCEKSRDQKVLVGAPKAESKYSTSVQSPGAVFKC
RVHTNPDRRCTELDMGRGNSRGTLCGKTCREDRDDEWMGVSLARQPKAGGSVLACAHRWK
NIYYETEYILPHGFCNIIPPNLQPNGRKLLPCYEEYKKKYGEEHGSCQAGIAGFFTEELV
IMGAPGSYYWTGTVKVLNLTDNTYFKLNDDAVIARRYTYLGYAVTAGHFSQPTTTDVVGG
APQDGGIGKVYIFRTDRRSGSLIKIFQASGKKMGSYFGSSLCAVDLNSDGLSDLLVGAPM
FSEIRDEGQVTVYINRGNGVLEEQLVLDGDSAYNAHFGESMAALGDIDDDGFPDVAIGAP
KEDNYIGAVYIYHGDANGIVPQYSMKLSGQTINPMLRMFGQSISGGVDMDSNGYPDMTVG
AFLSDNVVLLRSRPVITMDISIFLPVSINITAPQCHDGLQPVNCLNVTACFRFSGKRVPG
EIGLNYNLTADVAKKEKSQQPRVYFVTSGETVGQITEKLQLSYMQEKCEHYLAYVKKRVK
DVISPIVFEAAYSLGAHVIERRKEDKELPALKPILRWKKGQKIAQRNQTVFERNCQSDDC
AADLKLQGKLLLSSVDDKTAYLALGAVRNISLNISISNVGDDAYDTNVFFNFSGELFFIK
MWQKEELGIACELLESDFLKCSVGFPFMRSKSRYDFSVIFDTSHLSGQEETLTFLVTAQS
GNLERTEFLHDNTLTLSVPLMHEVDSSISGEVFPTSFFYGDSVEASNFVQLENHECLFQS
LNFTLQVYNAGPSTLPGAFLDISFPNRLSATGAEIFHVQQMMVGQDKGSCSFHRNPSPCV
VPQENENIFHTIFAFFTKSGRKVLDCERPGRSCLIIRCNLSSLAKAESCDISVYTLLNTE
ILKKDSSSVIQFVTRARVQVDPDLRVVEVPNGSPEEKPVVFEALHNLEPRGYVVGWIIAI
SLLVGILIFLLLAVLLWKMGFFRRRYKEIIEAEKSRKENEDSWDWVQKNQ
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Identical sequences XP_005236546.1.75256

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