SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_005399766.1.28644 from NCBI 2017_08 genome

(show help)
Strong hits

Sequence:	XP_005399766.1.28644
Domain Number 1	Region: 354-665
Classification Level	Classification	E-value
Superfamily	Integrin alpha N-terminal domain	2.75e-52
Family	Integrin alpha N-terminal domain	0.0000847
Further Details:

Domain Number 2	Region: 188-379
Classification Level	Classification	E-value
Superfamily	vWA-like	1.39e-46
Family	Integrin A (or I) domain	0.0000352
Further Details:

Domain Number 3	Region: 817-947
Classification Level	Classification	E-value
Superfamily	Integrin domains	2.56e-28
Family	Integrin domains	0.0041
Further Details:

Domain Number 4	Region: 667-813
Classification Level	Classification	E-value
Superfamily	Integrin domains	0.00000022
Family	Integrin domains	0.023
Further Details:

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by

Molecular Function	IC (bits)	H-Score

Biological Process	IC (bits)	H-Score

Cellular Component	IC (bits)	H-Score

External link(s)	XP_005399766.1.28644
Sequence length	1167
Comment	PREDICTED: integrin alpha-E isoform X3 [Chinchilla lanigera]; AA=GCF_000276665.1; RF=representative genome; TAX=34839; STAX=34839; NAME=Chinchilla lanigera; AL=Scaffold; RT=Major
Sequence	MWLVHALLCMSNLAPLGAFNVDVARPWVTREGGEPFVLSSLLHQDPRTNQTWLLLTSPRS DRTSAPLHQCSLLRDEIVCQPVEHVLIPKGRHQGVTAVRNHHGVLICVQVQAQRPHSLSS ELTGACSLLAPDLRLRAQASFTDLENLLDPDTYVDANCNKNRGGSTGEEENRARKPRALE KVEEEEEEEEAGTEIAIILDGSGSIDPQDFQKAKDFIFNMMEMFYEKCFECSFALVQYGT VIQTEFDLRDSQDVNASLARIQNIVQVGNVTKTASAMQHVLDNIFTPSRGSRKKASKVMV VLTDGDIFEDPLNLTTVINSPKMQGVERFAIGVGNAFNNTRTERELKQIASTPSETHAFK VADYEALKELLSKLQQNIIHTEGTVGEALRYQLAQTGFSAQILDEGQVLLGAVGAFNWSG GALLYNTQCRRGHFLNQTGADTGAAQYSYLGYSVAVLHKACGVSYIAGAPRYRQRGAVFE LQPDSREATFVQVLEEKQLGSYFGSELCPVDIDMDGITDVLLVAAPFYHVHGEEGRVYMY RLYEQNCSFSSPHVLSGNPGFPSARFGFAMAAVGDINQDKFTDVVIGAPLEGLEVDDGAS FGSVYIYNGHQDGLSASPSQWIRASAVASGLHYFGVSVAGGLDFSGDGLADITVATLGQA TVLRSGPVVRLKVSMTFTPSALPIGFKGRVDGHLCFEMSSTMAAAESGLRETSLNFTVGV DVEKSRKRLQCVNARDCLSHHQKWNRGPRLCNNLQLVSPEGELCEEDCFSNITVKVSYQL QAPEGRERHPCPILDIYEEPSAVFQLPYEKVCKNKLFCIADLQLATTISQQELVVGLTKE LTMNISLTNSGEDSYMTRMTLNYPRNLQFKRLQKPPSPNIQCADPKPTASILVMNCKMGY PILKRSSVNMSVVWQLEESVFPNRTADITVTISNSNERSLAREIHNLQFRHAFTAVLSKP SVMYMNTSQQLSDHKEFLFNIHGENLFGARFQLQICIPIKSQGLQVVRVKNLKKIQTSTV CTQSEERACGSDPVQHVEEWHSVSCAITSDKENVTVAAEISVGHSKQLLREITELQVLGE ISFNKDLYEGLNAENHRTKITVIFLKDEVYHSLPLIIGSSVGGLLVLIVIIIILFKCGFF KRKYQQRNLESMRRAQLKADDLFTEEN
Download sequence
Identical sequences	XP_005399766.1.28644

SEARCH