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Domain assignment for XP_005429363.1.5688 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005429363.1.5688
Domain Number 1 Region: 17-359
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 2.62e-70
Family Integrin alpha N-terminal domain 0.00000472
Further Details:      
 
Domain Number 2 Region: 360-522
Classification Level Classification E-value
Superfamily Integrin domains 1.15e-29
Family Integrin domains 0.0016
Further Details:      
 
Domain Number 3 Region: 525-662
Classification Level Classification E-value
Superfamily Integrin domains 2.25e-26
Family Integrin domains 0.0054
Further Details:      
 
Domain Number 4 Region: 670-847
Classification Level Classification E-value
Superfamily Integrin domains 0.00000000000000183
Family Integrin domains 0.0086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005429363.1.5688
Sequence length 936
Comment PREDICTED: integrin alpha-9 [Geospiza fortis]; AA=GCF_000277835.1; RF=representative genome; TAX=48883; STAX=48883; NAME=Geospiza fortis; AL=Scaffold; RT=Major
Sequence
MGRGNSRGMLCGKTCKEDRDDEWMGVSLARQPKAGGSVLACAHRWKNIYYETEYILPHGF
CNIIPPDLQSKGRKLLPCYEEYKKKYGEEHGSCQAGIAGFFTKELVIMGAPGSYYWTGTV
KVLNLTDNTYYKLNDDAVIARRYTYLGYAVTAGHFSQPTTTDIVGGAPQDGGIGKVYIFR
TDRQSGSLIKIFQASGKKMGSYFGSSLCAVDLNSDGLSDLLVGAPLFSEIRDEGQVTVYI
NRGNGVLEEQLTLDGDSAYNAHFGESMAALGDIDDDGFPDVAIGAPKEDNYIGAVYIYHG
DANGIIPQYSMKLSGQTINPKLRMFGQSISGGVDMDSNGYPDMTVGAFLSDNVVLLRSRP
VITMDVAIFLPISINITAPQCHDGLQPVNCLNITACFRFSGKHVPGEIGLNYNLTADVAK
KEKSQQPRVYFVTSGETAGQITEKLQLSFMQEKCEHYLAYVKKRVKDVISPIVFEASYSL
GEHTIERGKEDKELAALKPILRWKKGQKIAQRNQTVFERNCQSDDCAADLKLQGKLLLSS
VDDRTAYLALGAVRNISLNIFISNTGDDAYDTNVFFNFSGELFFIKMWQKEELGIACELL
ESDFLKCSVGFPFMRSKSRYEFNVIFDTSHLTGQEETLTFLVTAQSGNLERTECLHDNTL
ILSVPLMHEVDSSINGEVFPTSFFYGDSVAASNFVQLENHECLFQSLNFTLQIYNAGPST
LPGAFLDISIPNRLSATGAEIFHIQQMMVGQDKGSCSFHRNHSPCVVPQENENIFHRIFA
FFTKSGRKVLDCERPGRSCLIVHCNISSLPKAESCDINIYMLLNTEILKKDSSSVIQFVT
RARLQVDHDLRVVEVPNGNPEEKPVVFEALHNLEPRGYVVGWIIAISLLVGILIFLLLAV
LLWKMGFFRRRYKEIIEAEKSRKENEDSWNWVQKNQ
Download sequence
Identical sequences XP_005429363.1.5688

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