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Domain assignment for XP_005679084.2.57651 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005679084.2.57651
Domain Number 1 Region: 142-385
Classification Level Classification E-value
Superfamily vWA-like 5.31e-77
Family Integrin A (or I) domain 0.000000579
Further Details:      
 
Domain Number 2 Region: 386-472
Classification Level Classification E-value
Superfamily Integrin domains 1.46e-21
Family Integrin domains 0.0017
Further Details:      
 
Domain Number 3 Region: 44-102
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000000000314
Family Plexin repeat 0.00095
Further Details:      
 
Domain Number 4 Region: 590-629
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000218
Family Integrin beta EGF-like domains 0.006
Further Details:      
 
Domain Number 5 Region: 546-584
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000642
Family Integrin beta EGF-like domains 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005679084.2.57651
Sequence length 767
Comment PREDICTED: integrin beta-8 isoform X2 [Capra hircus]; AA=GCF_001704415.1; RF=representative genome; TAX=9925; STAX=9925; NAME=Capra hircus; breed=San Clemente; AL=Chromosome; RT=Major
Sequence
MCRSALVFFTATFVCLQKCRPGPAPFLRAAWMFSVVLGLGQSEDNRCASSNAVSCTKCLA
LGPDCGWCAQEDFISGESKNERCDTVSNLIHKGCSIDLIEYPSVRVIPSENEINTQVTPG
EVLIQLHQGAEANFMLKIHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFS
RDFRLGFGSYVDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAV
HRQKISGNIDTPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVV
PNDGNCHLKNNVYVRSTSMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGT
IAGEIESKAANLNNLVVEAYQKLISEVKVQVENQVKGIYFNITAICPDGTRKPGTDGCGN
VTSNDEVLFNVTVTMEKCDVTGGKSYAIIKPIGFNETTKIHIHRNCSCQCDDSRGPKRKC
VEETFLDAKCFQCDENKCHIDEDTFSSESCKSHKDQPVCSGRGVCICGKCLCHKIKFGKV
YGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFRGWEGDRCQCPSASAQLCVSPKGQVC
SGRGTCVCGRCECTDPRSIGRFCEHCPTCHTGCSENWNCVQCLHPHNLSQAILDQCKTSC
ALKEQHYADQTSECFSSPSYLRIFFIIFIVTFLIGLLKVLIIRQVILQWNNNKIKSSADY
RVSASKKDKLILQSVCTRAVTYRREKPEEIKMDISKLNAHETFRCNF
Download sequence
Identical sequences XP_005679084.2.57651

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