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Domain assignment for XP_005979676.1.78601 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005979676.1.78601
Domain Number 1 Region: 487-692
Classification Level Classification E-value
Superfamily Clavaminate synthase-like 1.18e-36
Family PhyH-like 0.069
Further Details:      
 
Domain Number 2 Region: 60-181
Classification Level Classification E-value
Superfamily ARID-like 6.67e-32
Family ARID domain 0.00074
Further Details:      
 
Domain Number 3 Region: 308-375
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 3.99e-17
Family PHD domain 0.0013
Further Details:      
 
Domain Number 4 Region: 1204-1278
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000000102
Family PHD domain 0.0077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005979676.1.78601
Sequence length 1579
Comment PREDICTED: lysine-specific demethylase 5C isoform X1 [Pantholops hodgsonii]; AA=GCF_000400835.1; RF=representative genome; TAX=59538; STAX=59538; NAME=Pantholops hodgsonii; AL=Scaffold; RT=Major
Sequence
MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVV
EEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRP
FDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
AGPKMMGLGLMAKDKTLRKKGECPPTVVVKEESGGDMKVESTSPKTFLESKEELSHSPEP
CTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKG
VWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKE
FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEVYDLKIKVPWAKELSTL
AKLSSLFHKYLTYQEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCW
HIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNP
NTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHY
RRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAE
REAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTL
DELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRFPNSELLQ
RLKNCLSEAEACVSRALGLVSGQEAGMTGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGI
LEQVEAYQAEACEALASLPSSPGLLQSLLERGRQLGVEVPEAQQLQRQVEQAQWLDEVKR
TLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQK
HPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVA
VGRDLPVGLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRS
RWMEKELGLYKSDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSTKPSPLA
SSTTASSATSICVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSPRPSPTPSPLLAWW
EWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQAL
ASEDVTALLGRLAELRQRLQAEPRPEEPPTYPSAPASDPLREGSGKDMPKVQGLLENGDS
MTSPEKVAPGEGSDLELLSSLLPRLTGPVLELPEATRAPLEELMLEGDLLEVTLDENQSI
WQLLQAGQPPDVERIRTLLELEKAERHGSRARGRALERRRRRKADRGGEGDDPAREELEP
KRVRSSGPEAEEAQEEEELEEETGGEGPPPPLPTTDSPSTQENGLEPALGASSGSSGPFP
TLTPRLHVPCPQQPPQQQL
Download sequence
Identical sequences XP_005979676.1.78601

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