SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_006100964.1.53796 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_006100964.1.53796
Domain Number 1 Region: 1447-1750
Classification Level Classification E-value
Superfamily Rap/Ran-GAP 6.54e-75
Family Rap/Ran-GAP 0.00035
Further Details:      
 
Domain Number 2 Region: 92-589
Classification Level Classification E-value
Superfamily ARM repeat 7.4e-19
Family Armadillo repeat 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_006100964.1.53796
Sequence length 1799
Comment PREDICTED: tuberin isoform X2 [Myotis lucifugus]; AA=GCF_000147115.1; RF=representative genome; TAX=59463; STAX=59463; NAME=Myotis lucifugus; AL=Scaffold; RT=Major
Sequence
MAKPTSKDSGLKEKFKTLLGLGTSRPNPRSAEGKQTEFVITADILRVSELPVSSPLASWE
ELSVECGLNNRIRVIGQICEVAKTKKFEDHAVEALWKAVADLLQPERPPEARHAVLALLK
AIVQGQGDRLGVLRALFFKVIKDYPSNEDLHERLEVFKALTDNGRHITYLEEELAEFVLQ
WMDIGLSSEFLLVLVNLVKFNSCYLDEYIASMVHMICLLCVQTVSSMDIEVSLQVLDAVV
CYNCLPAESLPLFIVTLCRTINVKELCEPCWKLMRNLLGTHLGHSAIYNMCRIMEDRAYM
EDAPLLRGAVFFVGMALWGAHRLHSLKNSPTSVLPSFYEAMTCPNEVVSYEIVLSITRLI
KKYKRELQAVTWDILLNIIERLLQQLQSLESPELRAIVHDLLTTVEELCDQNEFHGSQER
YFELIERCADQRPESSLLNLITYRAQSIHPAKVGWIHNLQLLMEKFFRSESRSAVRIKVL
DVLSFVLLINRQFYEEELINTVVISQLSHIPEDRDHQVRKLATQLLVDLAEGCHTHHFNS
LLDIIEKVIARSLSPPPELEERDMAAYSASLEDVKTAVLGLLVILQTKLYTLPASHAMRV
YEMLVSHIQLHYKHSYTLPIASSIRLQAFDFLLLLRADSLHRLGLPTKDGVVRFSPYCLC
DYMEVERGSEKKASGPLSPPTGLSGPASAGPAVRLGSLPYSLVFCVLLQCLKQETDWKVL
KLVLSKLPESLRYKVLIFTSPCSVDQLSSALCSMLSGPKTLERLRGTPEGFSRTDLHLAV
VPVLTALISYHNYLDKAKQREMVYCLEQGLIFRCASQCVVALAICSVEMPDIMIKALPIL
VVKLTHISATASMAIPLLEFLSTLARLPHLYRNFAAEQYASVFAISLPYTNPSKFNQYIV
CLAHHVIAMWFIRCRLPFRKDFVPFITKGLRSNVLRSFDDTPEKDSFRARSTSLNERPKS
LRIARPPKQGLNNSPPVKEFKESSAADAFRCRSISVSEHVVRRIQTSLTSASLGSADENS
MAQADDNLKNLHLELTETCLDMMARYVFSNFTAVPKRSPVGEFLLAGGRTKTWLVGNKLI
TVTTSVGTGTRSLLGLDSGELEGSPELSSDLSMHRRQTKEAPAKLESQAGQQVCLGARDR
VRSMSGGHGLRIGALDTAASHFPGSPAFPGPQTAPASKPEKASASTQRPVQKEKTNLAAY
VPLLTQGWAEILVRRPTGNTSWLMSLENPLSPFSSDINNMPLQELSNALMAAERFKERRD
TALYKSLSVPAASSAKPSPPPRSNTDSAVVLEEGSPDEANLLPPELEDFEATLGPDRRCR
HAEAYSRSSSTSSQEEKSFRAEELSAGGIPIERAVSSEAARPSVDLSFQPSQPLSKSSSS
PELQTLQDILGDPGNKADVGRLSPEAKARSQSGILDGEGAAWSAPGEASRGPSHAEGPMP
SSCPRSPSGLRPRGYTISDSAPSRRGKRVERDSFKSRAGASNAEKVPGINPSFVFLQLYH
SPFFGDESNKPILLPNESFERSVQLLDQIPSYDTHKIAVLYVGEGQSNSELAILSNEHGS
YRYTEFLTGLGKLIELKDCQPDKVYLGGLDVCGEDGQFTYCWHDDIMQAVFHIATLMPTK
DVDKHRCDKKRHLGNDFVSIVYNDSGEDFKLGTIKGQFNFVHVIITPLDYECNLVSLQCR
KDMEGLVDTSVAKIVSDRNLPFVARQMALHANMASQVHHSRSNPTDIYPSKWIARLRHIK
RLRHRIREEAHYSNPSLPLMHPTGHAKAPAQAPAEPMPTYETGQRKRLISSVDDFTEFV
Download sequence
Identical sequences XP_006100964.1.53796

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]