SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_006100966.1.53796 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_006100966.1.53796
Domain Number 1 Region: 1434-1737
Classification Level Classification E-value
Superfamily Rap/Ran-GAP 6.41e-75
Family Rap/Ran-GAP 0.00035
Further Details:      
 
Domain Number 2 Region: 45-231,270-578
Classification Level Classification E-value
Superfamily ARM repeat 1.93e-20
Family Armadillo repeat 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_006100966.1.53796
Sequence length 1786
Comment PREDICTED: tuberin isoform X3 [Myotis lucifugus]; AA=GCF_000147115.1; RF=representative genome; TAX=59463; STAX=59463; NAME=Myotis lucifugus; AL=Scaffold; RT=Major
Sequence
MAKPTSKDSGLKEKFKTLLGLGTSRPNPRSAEGKQTEFVITADILRELSVECGLNNRIRV
IGQICEVAKTKKFEDHAVEALWKAVADLLQPERPPEARHAVLALLKAIVQGQGDRLGVLR
ALFFKVIKDYPSNEDLHERLEVFKALTDNGRHITYLEEELAEFVLQWMDIGLSSEFLLVL
VNLVKFNSCYLDEYIASMVHMICLLCVQTVSSMDIEVSLQVLDAVVCYNCLPAESLPLFI
VTLCRTINVKELCEPCWKLMRNLLGTHLGHSAIYNMCRIMEDRAYMEDAPLLRGAVFFVG
MALWGAHRLHSLKNSPTSVLPSFYEAMTCPNEVVSYEIVLSITRLIKKYKRELQAVTWDI
LLNIIERLLQQLQSLESPELRAIVHDLLTTVEELCDQNEFHGSQERYFELIERCADQRPE
SSLLNLITYRAQSIHPAKVGWIHNLQLLMEKFFRSESRSAVRIKVLDVLSFVLLINRQFY
EEELINTVVISQLSHIPEDRDHQVRKLATQLLVDLAEGCHTHHFNSLLDIIEKVIARSLS
PPPELEERDMAAYSASLEDVKTAVLGLLVILQTKLYTLPASHAMRVYEMLVSHIQLHYKH
SYTLPIASSIRLQAFDFLLLLRADSLHRLGLPTKDGVVRFSPYCLCDYMEVERGSEKKAS
GPLSPPTGLSGPASAGPAVRLGSLPYSLVFCVLLQCLKQETDWKVLKLVLSKLPESLRYK
VLIFTSPCSVDQLSSALCSMLSGPKTLERLRGTPEGFSRTDLHLAVVPVLTALISYHNYL
DKAKQREMVYCLEQGLIFRCASQCVVALAICSVEMPDIMIKALPILVVKLTHISATASMA
IPLLEFLSTLARLPHLYRNFAAEQYASVFAISLPYTNPSKFNQYIVCLAHHVIAMWFIRC
RLPFRKDFVPFITKGLRSNVLRSFDDTPEKDSFRARSTSLNERPKSLRIARPPKQGLNNS
PPVKEFKESSAADAFRCRSISVSEHVVRSRIQTSLTSASLGSADENSMAQADDNLKNLHL
ELTETCLDMMARYVFSNFTAVPKRSPVGEFLLAGGRTKTWLVGNKLITVTTSVGTGTRSL
LGLDSGELEGSPELSSDLSMHRRQTKEAPAKLESQAGQQVCLGARDRVRSMSGGHGLRIG
ALDTAASHFPGSPAFPGPQTAPASKPEKASASTQRPVQKEKTNLAAYVPLLTQGWAEILV
RRPTGNTSWLMSLENPLSPFSSDINNMPLQELSNALMAAERFKERRDTALYKSLSVPAAS
SAKPSPPPRSNTDSAVVLEEGSPDEANLLPPELEDFEATLGPDRRCRHAEAYSRSSSTSS
QEEKSFRAEELSAGGIPIERAVSSEAARPSVDLSFQPSQPLSKSSSSPELQTLQDILGDP
GNKADVGRLSPEAKARSQSGILDGEGAAWSAPGEASRGPSHAEGPMPSSCPRSPSGLRPR
GYTISDSAPSRRGKRVERDSFKSRAGASNAEKVPGINPSFVFLQLYHSPFFGDESNKPIL
LPNESFERSVQLLDQIPSYDTHKIAVLYVGEGQSNSELAILSNEHGSYRYTEFLTGLGKL
IELKDCQPDKVYLGGLDVCGEDGQFTYCWHDDIMQAVFHIATLMPTKDVDKHRCDKKRHL
GNDFVSIVYNDSGEDFKLGTIKGQFNFVHVIITPLDYECNLVSLQCRKDMEGLVDTSVAK
IVSDRNLPFVARQMALHANMASQVHHSRSNPTDIYPSKWIARLRHIKRLRHRIREEAHYS
NPSLPLMHPTGHAKAPAQAPAEPMPTYETGQRKRLISSVDDFTEFV
Download sequence
Identical sequences XP_006100966.1.53796

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]