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Domain assignment for XP_006105327.1.53796 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_006105327.1.53796
Domain Number 1 Region: 33-464
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 1.02e-73
Family Integrin alpha N-terminal domain 0.00000841
Further Details:      
 
Domain Number 2 Region: 759-995
Classification Level Classification E-value
Superfamily Integrin domains 3.4e-41
Family Integrin domains 0.0037
Further Details:      
 
Domain Number 3 Region: 464-616
Classification Level Classification E-value
Superfamily Integrin domains 1.99e-26
Family Integrin domains 0.0018
Further Details:      
 
Domain Number 4 Region: 618-754
Classification Level Classification E-value
Superfamily Integrin domains 1.67e-20
Family Integrin domains 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_006105327.1.53796
Sequence length 1066
Comment PREDICTED: integrin alpha-3 isoform X1 [Myotis lucifugus]; AA=GCF_000147115.1; RF=representative genome; TAX=59463; STAX=59463; NAME=Myotis lucifugus; AL=Scaffold; RT=Major
Sequence
MGPSPRLATPVLRPTLCALALIVAAGGRVASAFNLDTRFLVVKEARNPGSLFGYSVALHR
QTEPQQRNLLLVGAPRDLAMSDGYTNRTGAVYLCPLSAHKDDCERMDITEKNDPDHHRIE
DMWLGVTVASQGPAGRVLVCAHRYTQVLWSGLEEQWRMVGKCYVRGNNLKLDHTDDWQTY
HNEMCNSNTDYLDTGMCQLGTSGGFTKNTVYFGAPGAYNWKGNSYMIQRKEWDLSEYSYK
DQEDQGNLYIGYTVQVGSAILHPTDITIVTGAPRHRHMGAVFLLSQEVGGDLRRRQVLEG
TQVGSYFGSAIALADLNNDGWQDLLVGAPYYFEQKEEVGGAVYVFMNQAGTSFPTHPSLL
LHGPSGSAFGFSVASIGDINQDGFQDIAVGAPFEGLGTIYIYHSSSRGLLQQPQQVIRGE
QLGLPGLASFGYSLSGKMDVDENLYPDLLVGSLSDRVVLLRARPVINILHRTLVARPSVL
DPALCTATSCVQVELCFAYNQSAGNPNYRRNITLAYTLEADRDRRPPRLRFAQSQSAVLH
GFFSMPERRCQNLELLLMDNIRDKLRPIVISMNYSLPLRLPDQPRLGLRSLDAYPVLNQA
QALENHTEVHFQKECGQDNKCDSNLQMQAAFVSEQGQRLSRLQYSKDLRKLFLSINVTNT
PSRERAGEDAHEALLTLAVPPALLLSSVRPSGTCQANETILCELGNPFKRNQRMELLIAF
EVIGVTLHTREFQAQLQLSTSSHQDNLLPMTLTLLVDYTLQASLSMVSQRLQSYFGGTVM
GESGMKTVEDVGSPLKYEFQVGPVGEGLAVLGTLVLGLEWPYEVANGKWLLYPTEITIRG
NGSWTCQPPGDLVNPLNLTLSVPEDRPPSPQRRRRQLDPGGVQGPPPVPLAAAKKAKSET
VLSCGSVHTRCVWLECPIPDVPVLTNVTVQARVWNSTFIEDYRDFDRVRVTSWATLFLRT
SVPTINMENKTVPFSVDIDSELGEELPTDIELWLVLVAVGAGLLLLGLIILLLWKCDFFK
RTRYYQIMPKYHAVRIREEERYPPPGGTLPTKKHWVTSWQTWDRYY
Download sequence
Identical sequences G1P3V5
ENSMLUP00000004615 ENSMLUP00000004615 XP_006105327.1.53796

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